Job Description P76403 Confidence 80.33% Date Thu Jan 5 12:22:42 GMT 2012 Rank 411 Aligned Residues 101 % Identity 16% Template d1ea9c3 SCOP info TIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain Resolution 3.2

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30														.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	K	N	M	R	Y	A	F	A	Y	G	A	D	A	V	Y	A	G	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	P	R	Y	S	L	R	V	R	N	N	E	F	N	H	E	N	L	Q	L	G	I	N	E	A	H	A	L	G	K	K	F	Y	V	V	V	N	I	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.												.	.																										.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																												.	.
Template Sequence		I	D	H	L	D	H	L	S	K	L	G	V	N	A	V	Y	F	T	P	L	F	K	A	T	T	N	H	K	Y	D	T	E	D	Y	F	Q	I	D	P	Q	F	G	.	.	D	K	D	T	L	K	K	L	V	D	L	C	H	E	R	G	I	R	V	L	L	D	A	V	F	N	H	S	G	R	T	F	P	P	F	V
Template Known Secondary structure				T								T		S								S	S		S	S	S	S	T	T	S		S		T	T				T	T	T		.	.													T	T	T	T										S	B			T	T	T
Template Predicted Secondary structure																																												.	.
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.			.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
																																														69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.		.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.													.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.													.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	P	H	N	A	K	L	K	T	F	I	R	D	L	K	P	V	V	.	E	M	G	P	D	A	L	I	M	S	D	P	.	.	.	.	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.													.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.													.	.	.	.	.
Template Conservation
Template Sequence		D	V	L	K	N	G	E	K	S	K	Y	K	D	W	F	H	I	R	S	L	P	L	E	V	V	D	G	I	P	T	Y	D	T	F	A	F	E	P	L	M	P	K	L	N	T	E	H	P	D	V	K	E	Y	L	L	K	A	A	E	Y	W	I	R	E	T	G	I	D	G	W	R	L	D	V	A	N	E	V	S	H
Template Known Secondary structure					T	T	T	T	T		T	T	T	T	S	S		B		S	S	S				T	T	S			S	B		B	S	S	S		T	T	S	B	B			T	T	S																					S					T	T		T	T	S
Template Predicted Secondary structure
Template SS confidence
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.
						99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure		.	.	.	.
Query SS confidence		.	.	.	.
Query Sequence		.	.	.	.	G	L	I	M	L	V	R	E	H	F	P	E	M	P	I	H	L
Query Conservation		.	.	.	.
Alig confidence		.	.	.	.
Template Conservation
Template Sequence		Q	F	W	R	E	F	R	R	V	V	K	Q	A	N	P	D	A	Y	I	L	G
Template Known Secondary structure																T	T
Template Predicted Secondary structure
Template SS confidence
		333	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions