Job Description P76403 Confidence 93.43% Date Thu Jan 5 12:22:42 GMT 2012 Rank 210 Aligned Residues 85 % Identity 35% Template d1cgta4 SCOP info TIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain Resolution 2.00

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		11	.	.	.	.	.	.	.	.	20	.	.							.	.	.	.	.	.	.																							30	.	.	.	.	.	.	.	.	.	40	.	.	.		.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.
Predicted Secondary structure														.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.
Query SS confidence														.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.
Query Sequence		G	T	L	K	N	M	R	Y	A	F	A	Y	.	.	.	.	.	.	G	A	D	A	V	Y	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	Q	P	R	Y	S	L	R	V	R	N	N	E	F	.	N	H	E	N	L	Q	L	G	I	N	E	A	H	A	L	G	K	K
Query Conservation														.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.
Alig confidence														.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.
Template Conservation
Template Sequence		G	D	W	Q	G	L	I	N	K	I	N	D	N	Y	F	S	D	L	G	V	T	A	L	W	I	S	Q	P	V	E	N	I	F	A	T	I	N	Y	S	G	V	T	N	T	A	Y	H	G	Y	W	A	R	D	F	K	K	T	N	P	Y	F	G	T	M	A	D	F	Q	N	L	I	T	T	A	H	A	K	G	I	K
Template Known Secondary structure													T	T						T															S					T	T						T	T	S		S									T	T	T																T	T
Template Predicted Secondary structure
Template SS confidence
		52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
		62	.	.	.	.	.																																																																.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	Y	V	V	V	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	A	P	H	N	A	K	L	K	T	F
Query Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	V	I	D	F	A	P	N	H	T	S	P	A	M	E	T	D	T	S	F	A	E	N	G	R	L	Y	D	N	G	T	L	V	G	G	Y	T	N	D	T	N	G	Y	F	H	H	N	G	G	S	D	F	S	S	L	E	N	G	I	Y	K	N	L	Y	D	L	A	D	F	N	H	N	N	A	T	I	D	K	Y	F
Template Known Secondary structure								T	T							T	T		T	T	S	T	T	T	T					T	T						S	T	T		T	T			B			S		B				S	S							S	B	B	T	T				B		T	T	S
Template Predicted Secondary structure
Template SS confidence
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	R	D	L	K	P	V	V	E	M	G	P	D	A	L	I	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	D	A	I	K	L	W	L	D	M	G	V	D	G	I	R	V
Template Known Secondary structure											T	T
Template Predicted Secondary structure
Template SS confidence
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions