Return to main results Retrieve Phyre Job Id

Job DescriptionP76403
Confidence82.15%DateThu Jan 5 12:22:42 GMT 2012
Rank398Aligned Residues102
% Identity8%Templatec3mw8A_
PDB info PDB header:lyaseChain: A: PDB Molecule:uroporphyrinogen-iii synthase; PDBTitle: crystal structure of an uroporphyrinogen-iii synthase (sama_3255) from2 shewanella amazonensis sb2b at 1.65 a resolution
Resolution1.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   50.........60.........70.........80.........90.........100.........110.... .....120.......
Predicted Secondary structure 


















..






Query SS confidence 
































































. .












Query Sequence  LGINEAHALGKKFYVVVNIAPHNAKLKTFIRDLKPVVEMGPDALIMSDPGLIMLVREHFPEMPIH. . LSVQANAVNWATV
Query Conservation 
 
  

  
 






 
    

      
  
   






 
 
 
 
 

  
 
 

.. 


 

 
  
 
Alig confidence 












.


















































..












Template Conservation   
   
   
  
.  
  
                     
 
 


                  
    

 

  

Template Sequence  AXADGLRLRGANV. SYLEVYQRACPPLDAPASVSRWQSFGIDTIVVTSGEVLENLINLVPKDSFAWLRDCHIIVPSARVE
Template Known Secondary structure  TT
.




T



SS
GGGSSS
Template Predicted Secondary structure 



.

















Template SS confidence 















































































   133......140..... ....150.........160.........170.........180.........190.........200.........210.
 
   128.130.........140.........150..
Predicted Secondary structure 








Query SS confidence 
























Query Sequence  KFWQQMGLTRVILSRELSLEEIEEI
Query Conservation   
    
  









 

  
Alig confidence 
























Template Conservation        
     

       

  
Template Sequence  TQARKKGLRRVTNAGAANQAAVLDA
Template Known Secondary structure  TT



SSSS
Template Predicted Secondary structure 








Template SS confidence 
























   212.......220.........230......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions