Job Description P76403 Confidence 90.03% Date Thu Jan 5 12:22:42 GMT 2012 Rank 297 Aligned Residues 117 % Identity 16% Template c3ldvB_ PDB info PDB header:lyase Chain: B: PDB Molecule:orotidine 5'-phosphate decarboxylase; PDBTitle: 1.77 angstrom resolution crystal structure of orotidine 5'-2 phosphate decarboxylase from vibrio cholerae o1 biovar3 eltor str. n16961 Resolution 1.77 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.					.	.	.	.	.	.	.	.	70	.	.	.	.	.											.	.	.	.	80
Predicted Secondary structure																																																	.	.	.	.															.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																	.	.	.	.															.	.	.	.	.	.	.	.	.	.
Query Sequence		N	M	R	Y	A	F	A	Y	G	A	D	A	V	Y	A	G	Q	P	R	Y	S	L	R	V	R	N	N	E	F	N	H	E	N	L	Q	L	G	I	N	E	A	H	A	L	G	K	K	.	.	.	.	F	Y	V	V	V	N	I	A	P	H	N	A	K	L	.	.	.	.	.	.	.	.	.	.	K	T	F	I	R
Query Conservation																																																	.	.	.	.															.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.	.	.	.																			.	.	.	.															.	.	.	.	.	.	.	.	.	.
Template Conservation																					.	.	.	.	.	.	.	.	.	.
Template Sequence		A	V	K	A	A	A	E	L	G	V	W	M	V	N	V	H	A	S	G	.	.	.	.	.	.	.	.	.	.	G	E	R	M	M	A	A	S	R	E	I	L	E	P	Y	G	K	E	R	P	L	L	I	G	V	T	V	L	T	S	M	E	S	A	D	L	Q	G	I	G	I	L	S	A	P	Q	D	H	V	L	R
Template Known Secondary structure										T		S						G	G	G	.	.	.	.	.	.	.	.	.	.													G	G	G	G	G	G	S								S		T	T									T	T			S
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.
Template SS confidence
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.											.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.			.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure																																												.	.
Query SS confidence																																												.	.
Query Sequence		D	L	K	P	V	V	E	M	G	P	D	A	L	I	M	S	D	P	G	L	I	M	L	V	R	E	H	F	P	E	M	P	I	H	L	S	V	Q	A	N	A	V	.	.	N	W	A	T	V	K	F	W	Q	Q	M	G	L	T	R	V	I	L	S	R
Query Conservation																																												.	.
Alig confidence																		.																										.	.
Template Conservation																		.
Template Sequence		L	A	T	L	T	K	N	A	G	L	D	G	V	V	C	S	.	A	Q	E	A	S	L	L	K	Q	H	L	G	R	E	F	K	L	V	T	P	G	I	R	P	A	Q	R	R	I	M	T	P	A	Q	A	I	A	S	G	S	D	Y	L	V	I	G	R
Template Known Secondary structure									T	T								.	T	T	T										T	T	S												T	T	S										T		S
Template Predicted Secondary structure																		.
Template SS confidence
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.		.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions