Job Description P76403 Confidence 70.86% Date Thu Jan 5 12:22:42 GMT 2012 Rank 490 Aligned Residues 73 % Identity 15% Template c3fwzA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:inner membrane protein ybal; PDBTitle: crystal structure of trka-n domain of inner membrane protein ybal from2 escherichia coli Resolution 1.79 Å

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		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.							.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure																						.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.
Query Sequence		I	R	D	L	K	P	V	V	E	M	G	P	D	A	L	I	M	S	D	P	.	.	.	.	.	.	G	L	I	M	L	V	R	E	H	F	P	E	M	P	I	H	L	S	V	Q	A	N	A	V	N	W	A	T	V	K	F	W	Q	Q	M	G	L	T	R	V	I	L	S	R	E	L	S	L	E	E	I	E	E	I
Query Conservation																						.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.																			.	.	.	.
Template Conservation																																														.	.	.	.
Template Sequence		E	E	I	X	Q	L	A	H	L	E	C	A	K	W	L	I	L	T	I	P	N	G	Y	E	A	G	E	I	V	A	S	A	R	A	K	N	P	D	I	E	I	I	A	R	.	.	.	.	A	H	Y	D	D	E	V	A	Y	I	T	E	R	G	A	N	Q	V	V	X	G	E	R	E	I	A	R	T	X	L	E	L
Template Known Secondary structure								T	T	G	G	G		S							S																	S	S	S						.	.	.	.		S	S										T	T		S
Template Predicted Secondary structure																																														.	.	.	.
Template SS confidence
		471	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.					.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.
		153	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	N	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	E	T
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		547	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions