Job Description P76403 Confidence 96.93% Date Thu Jan 5 12:22:42 GMT 2012 Rank 40 Aligned Residues 158 % Identity 16% Template c3eooL_ PDB info PDB header:lyase Chain: L: PDB Molecule:methylisocitrate lyase; PDBTitle: 2.9a crystal structure of methyl-isocitrate lyase from2 burkholderia pseudomallei Resolution 2.90 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.					.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																																					.	.	.	.
Query SS confidence																																					.	.	.	.
Query Sequence		F	K	P	E	L	L	S	P	A	G	T	L	K	N	M	R	Y	A	F	A	Y	G	A	D	A	V	Y	A	G	Q	P	R	Y	S	L	.	.	.	.	R	V	R	N	N	E	F	N	H	E	N	L	Q	L	G	I	N	E	A	H	A	L	G	K	K	F	Y	V	V	V	N	I	A	P	H	N	A	K	L	K	T
Query Conservation																																					.	.	.	.
Alig confidence																																					.	.	.	.																							.
Template Conservation																																																															.
Template Sequence		E	Q	P	L	Q	V	V	G	A	I	T	A	Y	A	A	K	M	A	E	A	V	G	F	K	A	V	Y	L	S	G	G	G	V	A	A	N	S	L	G	I	P	D	L	G	I	S	T	M	D	D	V	L	V	D	A	N	R	I	T	N	A	.	T	N	L	P	L	L	V	D	I	D	T	G	W	G	G	A	F	N
Template Known Secondary structure		S	S	S							S	S										T	T		S																S		S	S	S																		.			S							T	T		S	S	S
Template Predicted Secondary structure																																																															.
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80		.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.																						.	.	100	.	.	.	.	.	.	.	.			.	110	.	.	.	.	.	.	.	.	.	120	.	.	.						.	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.																.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.																.	.	.	.	.
Query Sequence		F	I	R	D	L	K	P	V	V	E	M	G	P	D	A	L	I	M	S	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	G	L	I	M	L	V	R	E	H	F	.	.	P	E	M	P	I	H	L	S	V	Q	A	N	A	V	N	.	.	.	.	.	W	A	T	V	K	F
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.																.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.																.	.	.	.	.
Template Conservation
Template Sequence		I	A	R	T	I	R	S	F	I	K	A	G	V	G	A	V	H	L	E	D	Q	V	G	Q	K	R	C	G	H	R	P	G	K	E	C	V	P	A	G	E	M	V	D	R	I	K	A	A	V	D	A	R	T	D	E	T	F	V	I	M	A	R	T	D	A	A	A	A	E	G	I	D	A	A	I	E	R	A	I	A
Template Known Secondary structure												T	T		S							B						T	T							B																		S		T	T	S
Template Predicted Secondary structure
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	Q	Q	M	G	L	T	R	V	I	L	S	R	E	L	S	L	E	E	I	E	E	I	R	N	Q	V	P	D	M	E	I
Query Conservation
Alig confidence																														.
Template Conservation																														.
Template Sequence		Y	V	E	A	G	A	D	M	I	F	P	E	A	M	K	T	L	D	D	Y	R	R	F	K	E	A	V	K	.	V	P	I
Template Known Secondary structure						T		S									S													.	S		B
Template Predicted Secondary structure																														.
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.		.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions