Job Description P76403 Confidence 76.16% Date Thu Jan 5 12:22:42 GMT 2012 Rank 439 Aligned Residues 105 % Identity 17% Template c3edeB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:cyclomaltodextrinase; PDBTitle: structural base for cyclodextrin hydrolysis Resolution 1.71 Å

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		11	.	.	.	.	.	.	.	.	20	.	.					.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.																.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.			.	.	.	.	.
Predicted Secondary structure														.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.
Query SS confidence														.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.
Query Sequence		G	T	L	K	N	M	R	Y	A	F	A	Y	.	.	.	.	G	A	D	A	V	Y	A	G	Q	P	R	Y	S	L	R	V	R	N	N	E	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	H	E	N	L	Q	L	G	I	N	E	A	H	A	L	G	K	K	F	Y	V	.	.	V	V	N	I	A
Query Conservation														.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.
Alig confidence														.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.
Template Conservation
Template Sequence		G	D	I	R	G	T	I	D	H	L	D	Y	I	A	G	L	G	F	T	Q	L	W	P	T	P	L	V	E	N	D	A	A	A	Y	S	Y	H	G	Y	A	A	T	D	H	Y	R	I	D	P	R	Y	G	S	N	E	D	F	V	R	L	S	T	E	A	R	K	R	G	M	G	L	I	Q	D	V	V	L	S	H	I
Template Known Secondary structure										T							T	T															S	S		G	G	G			S		S							T	T	T																T	T										S	B
Template Predicted Secondary structure
Template SS confidence
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
																																																													70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.		.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	H	N	A	K	L	K	T	F	I	R	D	L	K	P	V	V	E	.	M	G
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Template Conservation
Template Sequence		G	K	H	H	W	W	M	K	D	L	P	T	P	D	W	I	N	Y	G	G	K	F	V	P	T	Q	H	H	R	V	A	V	Q	D	P	Y	A	A	Q	A	D	S	E	N	F	T	K	G	W	F	V	E	G	M	P	D	L	N	Q	T	N	P	L	V	A	N	Y	L	I	Q	N	N	I	W	W	I	E	Y	A	G
Template Known Secondary structure			T	T		G	G	G	G	S		S	S	T	T	S	B	G	G	G	G	S			B					G	G	G	G	S		T	T												S	B	S	S	T	T	S		B	B		T	T	S																			T
Template Predicted Secondary structure
Template SS confidence
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
		90	.	.	.	.	.	.	.	.										.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.
Query Sequence		P	D	A	L	I	M	S	D	P	.	.	.	.	.	.	.	.	.	G	L	I	M	L	V	R	E	H	F	P	E	M	P	I	H	L
Query Conservation											.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	S	G	L	R	I	D	T	Y	G	Y	S	D	G	A	F	L	T	E	Y	T	R	R	L	M	A	E	Y	P	R	L	N	M	V	G
Template Known Secondary structure			S					S	S	G	G	G	S																	T	T
Template Predicted Secondary structure
Template SS confidence
		305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions