Return to main results Retrieve Phyre Job Id

Job DescriptionP76403
Confidence77.61%DateThu Jan 5 12:22:42 GMT 2012
Rank429Aligned Residues129
% Identity13%Templatec3ceuA_
PDB info PDB header:transferaseChain: A: PDB Molecule:thiamine phosphate pyrophosphorylase; PDBTitle: crystal structure of thiamine phosphate pyrophosphorylase2 (bt_0647) from bacteroides thetaiotaomicron. northeast3 structural genomics consortium target btr268
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   10.........20.........30.........40.........50.... .....60.........70.........80........
Predicted Secondary structure 





















.









Query SS confidence 












































.

































Query Sequence  AGTLKNMRYAFAYGADAVYAGQPRYSLRVRNNEFNHENLQLGINE. AHALGKKFYVVVNIAPHNAKLKTFIRDLKPVVEM
Query Conservation 

 

 
 


  





 
   
  
  
 


 


 
 
  .

  
 






 
    

      
  
   
Alig confidence 



















.........















.









..............









Template Conservation    
   
  

  

  


.........
 
     
    
  
       


..............

   

   
Template Sequence  VEEDKIITALFEEGLDILHL. . . . . . . . . RKPETPAXYSERLLTLIPEKYHRRIVT. . . . . . . . . . . . . . HEHFYLKEEF
Template Known Secondary structure  TTTT

.........

SS

S
GGGGGG..............SS
TTT
Template Predicted Secondary structure 





.........






..............


Template SS confidence 















































































   13......20.........30.. .......40.........50......... 60.........
 
   8990.........100.........110.........120.........130.........140.. .......150.........160......
Predicted Secondary structure 





















..







Query SS confidence 





















































. .























Query Sequence  GPDALIMSDPGLIMLVREHFPEMPIHLSVQANAVNWATVKFWQQMGLTRVILSR. . ELSLEEIEEIRNQVPDMEIEIFVH
Query Conservation 






 
 
 
 
 

  
 
 

 


 

 
  
  
    
  





..



 

  
       






Alig confidence 









...














....







.












..























Template Conservation 

 



   ...
          

 
.... 
   

 .
    



  



 
 

              

 

Template Sequence  NLXGIHLNAR. . . NPSEPHDYAGHVSCS. . . . CHSVEEVK. NRKHFYDYVFXSPIYSTYTAEELREAQKAKIIDSKVXAL
Template Known Secondary structure  T
S

SS...S
S

TT

S....
S.TTGGGSS







TT
SSTT
Template Predicted Secondary structure 



...




....

.




















Template SS confidence 















































































   70......... 80.........90.... .....100.. .......110.........120.........130.........140.
 
   167..
Predicted Secondary structure 


Query SS confidence 


Query Sequence  GAL
Query Conservation 


Alig confidence 


Template Conservation 


Template Sequence  GGI
Template Known Secondary structure  SS
Template Predicted Secondary structure 


Template SS confidence 


   151..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions