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Job DescriptionP76403
Confidence89.51%DateThu Jan 5 12:22:42 GMT 2012
Rank315Aligned Residues92
% Identity22%Templatec2zidA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:dextran glucosidase; PDBTitle: crystal structure of dextran glucosidase e236q complex with2 isomaltotriose
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   910.........20.. .......30.........40... ......50.........60........
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Query Sequence  PAGTLKNMRYAFAY. . . . GADAVYAGQPRYSLRVRNNEF. . . . . . . . . . . . . NHENLQLGINEAHALGKKFYVVVNI. . .
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Template Sequence  GIGDLKGITSKLDYLQKLGVMAIWL. SPVYDSPMDDNGYDIANYEAIADIFGNMADMDNLLTQAKMRGIKIIMDLVVNHT
Template Known Secondary structure  SS

TTT
S.





TTTTSS
S
GGG

TTT


SB
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   26...30.........40.........50 .........60.........70.........80.........90.........100....
 
   6970.........80......
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . APHNAKLKTFIRDLKPVV
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Template Sequence  SDEHAWFIEAREHPDSSERDYYIWCDQPNDLESIFGGSAWQYDDKSDQYYLHFFSKKQPDLNWENANLRQKIYDMMNFWI
Template Known Secondary structure 
TTS
TTSGGGGGB
SS

S
B
TTSSBSTTTT
SS
TTS
BB
TT
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   105....110.........120.........130.........140.........150.........160.........170.........180....
 
   87..90.........100.
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Query Sequence  EMGPDALIMSDPGLI
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Template Sequence  DKGIGGFRMDVIDMI
Template Known Secondary structure  TTT

TTGGGT
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   185....190.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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