Job Description P76403 Confidence 81.60% Date Thu Jan 5 12:22:42 GMT 2012 Rank 405 Aligned Residues 113 % Identity 8% Template c2qghA_ PDB info PDB header:lyase Chain: A: PDB Molecule:diaminopimelate decarboxylase; PDBTitle: crystal structure of diaminopimelate decarboxylase from helicobacter2 pylori complexed with l-lysine Resolution 2.30 Å

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		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.					.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.
Query SS confidence																	.	.	.	.
Query Sequence		F	N	H	E	N	L	Q	L	G	I	N	E	A	H	A	.	.	.	.	L	G	K	K	F	Y	V	V	V	N	I	A	P	H	N	A	K	L	K	T	F	I	R	D	L	K	P	V	V	E	M	G	P	D	A	L	I	M	S	D	P	G	L	I	M	L	V	R	E	H	F	P	E	M	P	I	H	L	S	V	Q
Query Conservation																	.	.	.	.
Alig confidence																	.	.	.	.																	.	.	.	.	.	.	.											.
Template Conservation																																					.	.	.	.	.	.	.											.
Template Sequence		Y	D	F	D	K	I	K	Q	A	F	L	N	Y	K	E	A	F	K	G	R	K	S	L	I	C	Y	A	L	K	A	N	S	N	L	S	.	.	.	.	.	.	.	I	L	S	L	L	A	H	L	E	S	.	G	A	D	C	V	S	I	G	E	I	Q	R	A	L	K	A	G	I	K	P	Y	R	I	V	F	S	G
Template Known Secondary structure																	T	T		S	S								G	G	G						.	.	.	.	.	.	.								T	T		.					S	S										T	T			G	G	G
Template Predicted Secondary structure																																					.	.	.	.	.	.	.											.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.								.	.	.	.	.	.	.	60	.	.		.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	N	A	V	N	W	A	T	V	K	F	W	Q	Q	M	G	L	T	R	V	I	L	S	R	E	L	S	L	E	E	I	E	E	I	R	N	Q	V	P	D	M	E	I	E	I	F	V
Query Conservation
Alig confidence		.																																						.
Template Conservation		.																																						.
Template Sequence		.	V	G	K	S	A	F	E	I	E	Q	A	L	K	L	N	I	L	F	L	N	V	E	S	F	M	E	L	K	T	I	E	T	I	A	Q	S	L	.	G	I	K	A	R	I	S	I
Template Known Secondary structure		.	T	T												T	T		S						S															.	T
Template Predicted Secondary structure		.																																						.
Template SS confidence
			90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.		.	.	.	130	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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