Job Description P76403 Confidence 95.14% Date Thu Jan 5 12:22:42 GMT 2012 Rank 137 Aligned Residues 156 % Identity 14% Template c2pz0B_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:glycerophosphoryl diester phosphodiesterase; PDBTitle: crystal structure of glycerophosphodiester phosphodiesterase (gdpd)2 from t. tengcongensis Resolution 1.91 Å

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		2	.	.	.	.	.	.	.	10	.									.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30																		.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.
Query Sequence		F	K	P	E	L	L	S	P	A	G	.	.	.	.	.	.	.	.	T	L	K	N	M	R	Y	A	F	A	Y	G	A	D	A	V	Y	A	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	P	R	Y	S	L	R	V	R	N	N	E	F	N	H	E	N	.	.	.	.	.	.	.	.	.
Query Conservation												.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	K	T	L	V	I	A	H	R	G	D	S	K	N	V	P	E	N	T	I	A	A	F	K	R	A	M	E	L	G	A	D	G	I	E	L	D	V	Q	L	T	K	D	G	H	L	V	V	I	H	D	E	T	V	D	R	T	T	N	G	E	G	F	V	K	D	F	T	L	E	E	I	K	K	L	D	A	G	I	K
Template Known Secondary structure										T	T	T	T	T	T	S		T	T	S											T		S										T	T							S	S	S	B	S	T	T	T	S	S			S	B	G	G	G	S						T	T	S		S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
														48	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.				.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.																																														.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.																																														.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	L	Q	L	G	I	N	E	A	H	A	L	G	K	K	F	Y	V	V	V	N	I	A	P	H	N	A	K	L	K	T	F	I	R	D	L	K	P	V	V	E	M	G	P	D	A	.	.	.	L	I	M	S	D	P	G	L	I	M	L	V	R	E	H	F	P	E	M	P
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.																																														.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																												.																		.	.	.
Template Conservation																																									.
Template Sequence		F	G	E	K	F	A	G	E	R	I	P	T	L	Y	E	V	F	E	L	I	G	D	K	D	F	L	V	N	I	E	I	K	S	G	I	V	L	Y	P	.	G	I	E	E	K	L	I	K	A	I	K	E	Y	N	F	E	E	R	V	I	I	S	S	F	N	H	Y	S	L	R	D	V	K	K	M	A	P	H	L	K
Template Known Secondary structure		T		G	G	G	T	T					B									T	T	S											S	S	S			T	.	T												T	T		T	T	T						S													T	T	S
Template Predicted Secondary structure																																									.
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.		.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	H	L	S	V	Q	A	N	A	V	N	W	A	T	V	K	F	W	Q	Q	M	G	L	T	R	V	I	L	S	R	E	L	S	L	E	E	I	E	E	I	R	N	Q	V	P	D	M	E	I
Query Conservation
Alig confidence															.	.																														.
Template Conservation															.	.																														.
Template Sequence		I	G	L	L	Y	Q	C	G	L	V	E	P	W	.	.	H	M	A	L	R	M	E	A	Y	S	L	H	P	F	Y	F	N	I	I	P	E	L	V	E	G	C	K	K	N	.	G	V	K	L
Template Known Secondary structure								S			S	S	T		.	.						T	T		S					B	G	G	G											T	T	.	T
Template Predicted Secondary structure															.	.																														.
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.			.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210		.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions