Job Description P76403 Confidence 90.68% Date Thu Jan 5 12:22:42 GMT 2012 Rank 284 Aligned Residues 127 % Identity 13% Template c2pljA_ PDB info PDB header:lyase Chain: A: PDB Molecule:lysine/ornithine decarboxylase; PDBTitle: crystal structure of lysine/ornithine decarboxylase complexed with2 putrescine from vibrio vulnificus Resolution 1.70 Å

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		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.		.	.	.	.	.	70	.	.		.	.	.	.	.	.																.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure																								.									.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.									.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	N	H	E	N	L	Q	L	G	I	N	E	A	H	A	L	G	K	K	F	Y	V	.	V	V	N	I	A	P	H	N	.	A	K	L	K	T	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	R	D	L	K	P	V	V	E	M	G	P	D	A	L	I	M	S	D	P	G	L	I	M	L	V	R
Query Conservation																								.									.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.									.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Template Conservation																																																																			.
Template Sequence		L	S	A	E	E	I	H	L	I	E	A	S	V	E	Q	F	G	A	P	L	L	L	L	D	C	D	V	I	R	Q	Q	Y	R	A	L	K	N	A	L	P	N	V	T	L	H	Y	A	L	K	P	L	P	H	P	V	V	V	R	T	L	L	A	E	G	A	.	S	F	D	L	A	T	T	G	E	V	E	L	V	A
Template Known Secondary structure																			S	S																				S	T	T							S	T	T														T		.						S
Template Predicted Secondary structure																																																																			.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.		.	.	.	.	.	.	.	90	.	.	.	.	.	.
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	H	F	P	E	M	P	I	H	L	S	V	Q	A	N	A	V	N	W	A	T	V	K	F	W	Q	Q	M	G	L	T	R	V	I	L	S	R	E	L	S	L	E	E	I	E	E	I	R	N	Q	V	P	D	M	E	I	E	I	F	V	H	G	A	L	C	M	A	Y	S
Query Conservation
Alig confidence															.																							.	.	.
Template Conservation															.																							.	.	.
Template Sequence		S	E	G	V	P	A	D	L	T	I	H	T	H	.	P	I	K	R	D	A	D	I	R	D	A	L	A	Y	G	C	N	V	F	V	V	D	.	.	.	N	L	N	E	L	E	K	F	K	A	Y	R	D	D	V	E	L	L	V	R	L	S	F	S	K	K	F	G	C	S
Template Known Secondary structure			T	T			G	G	G						.	S	S													T								.	.	.	S						T	T	G	G	G	T	T	T							B						S		B
Template Predicted Secondary structure															.																							.	.	.
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.				.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions