Job Description P76403 Confidence 78.14% Date Thu Jan 5 12:22:42 GMT 2012 Rank 424 Aligned Residues 130 % Identity 18% Template c2d69B_ PDB info PDB header:lyase Chain: B: PDB Molecule:ribulose bisphosphate carboxylase; PDBTitle: crystal structure of the complex of sulfate ion and octameric2 ribulose-1,5-bisphosphate carboxylase/oxygenase (rubisco) from3 pyrococcus horikoshii ot3 (form-2 crystal) Resolution 1.90 Å

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		1	.	.	.	.		.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.					.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.					.	.	50	.	.	.	.	.	.	.		.	.	60	.	.	.	.	.	.	.	.	.	70
Predicted Secondary structure							.																							.	.	.	.																					.	.	.	.											.
Query SS confidence							.																							.	.	.	.																					.	.	.	.											.
Query Sequence		M	F	K	P	E	.	L	L	S	P	A	G	T	L	K	N	M	R	Y	A	F	A	Y	G	A	D	A	V	.	.	.	.	Y	A	G	Q	P	R	Y	S	L	R	V	R	N	N	E	F	N	H	E	N	.	.	.	.	L	Q	L	G	I	N	E	A	H	A	.	L	G	K	K	F	Y	V	V	V	N	I	A	P
Query Conservation							.																							.	.	.	.																					.	.	.	.											.
Alig confidence							.																							.	.	.	.									.	.	.	.	.	.	.	.					.	.	.	.											.													.
Template Conservation																																										.	.	.	.	.	.	.	.																																.
Template Sequence		V	P	K	P	K	M	G	W	S	V	E	E	Y	A	E	I	A	Y	E	L	W	S	G	G	I	D	L	L	K	D	D	E	N	F	T	S	F	P	F	N	.	.	.	.	.	.	.	.	R	F	E	E	R	V	R	K	L	Y	R	V	R	D	R	V	E	A	E	T	G	E	T	K	E	Y	L	I	N	I	T	.
Template Known Secondary structure				S	S	S	S																		T		S						T	T				B	T	T	B	.	.	.	.	.	.	.	.																					S	S							B			.
Template Predicted Secondary structure																																										.	.	.	.	.	.	.	.																																.
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.									.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.					.	.	.	100	.	.	.	.	.	.	.	.	.			110	.	.	.	.	.	.	.	.	.	120											.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure																												.	.	.	.														.	.												.	.	.	.	.	.	.	.	.	.
Query SS confidence																												.	.	.	.														.	.												.	.	.	.	.	.	.	.	.	.
Query Sequence		H	N	A	K	L	K	T	F	I	R	D	L	K	P	V	V	E	M	G	P	D	A	L	I	M	S	.	.	.	.	D	P	G	L	I	M	L	V	R	E	H	F	P	.	.	E	M	P	I	H	L	S	V	Q	A	N	.	.	.	.	.	.	.	.	.	.	A	V	N	W	A	T	V	K	F	W	Q	Q	M	G
Query Conservation																												.	.	.	.														.	.												.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.																									.	.	.	.														.	.												.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.
Template Sequence		.	.	G	P	V	N	I	M	E	K	R	A	E	M	V	A	N	E	G	G	Q	Y	V	M	I	D	I	V	V	A	G	W	S	A	L	Q	Y	M	R	E	V	T	E	D	L	G	L	A	I	H	A	H	R	A	M	H	A	A	F	T	R	N	P	R	H	G	I	T	M	L	A	L	A	K	A	A	R	M	I	G
Template Known Secondary structure		.	.	S	S														T	T																											T								T	T	T					S		T	T	S															T
Template Predicted Secondary structure		.	.
Template SS confidence
				229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
		135	.	.	.	.	140	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	R	V	I	L	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	D	Q	I	H	T	G
Template Known Secondary structure			S
Template Predicted Secondary structure
Template SS confidence
		307	.	.	310	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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