Job Description P76403 Confidence 96.53% Date Thu Jan 5 12:22:42 GMT 2012 Rank 57 Aligned Residues 137 % Identity 17% Template c1ydnA_ PDB info PDB header:lyase Chain: A: PDB Molecule:hydroxymethylglutaryl-coa lyase; PDBTitle: crystal structure of the hmg-coa lyase from brucella melitensis,2 northeast structural genomics target lr35. Resolution 2.30 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.		.	.	.	.	.	.					.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70						.
Predicted Secondary structure																																										.							.	.	.	.																								.	.	.	.	.
Query SS confidence																																										.							.	.	.	.																								.	.	.	.	.
Query Sequence		F	K	P	E	L	L	S	P	A	G	T	L	K	N	M	R	Y	A	F	A	Y	G	A	D	A	V	Y	A	G	Q	P	R	Y	S	L	R	V	R	N	N	.	E	F	N	H	E	N	.	.	.	.	L	Q	L	G	I	N	E	A	H	A	L	G	K	K	F	Y	V	V	V	N	I	A	P	.	.	.	.	.	H
Query Conservation																																										.							.	.	.	.																								.	.	.	.	.
Alig confidence																																										.							.	.	.	.																								.	.	.	.	.
Template Conservation
Template Sequence		D	G	V	R	Y	S	V	L	V	P	N	X	K	G	Y	E	A	A	A	A	A	H	A	D	E	I	A	V	F	I	S	A	S	E	G	F	S	K	A	N	I	N	C	T	I	A	E	S	I	E	R	L	S	P	V	I	G	A	A	I	N	D	G	L	A	I	R	G	Y	V	S	C	V	V	E	C	P	Y	D	G
Template Known Secondary structure		S	S	S							S	S										T	T		S								S									T	S	S																			T	T										S	S			T	T	T
Template Predicted Secondary structure
Template SS confidence
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.											100	.	.	.	.	.	.	.	.	.	110	.	.	.					.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.															.	.	.	.
Query SS confidence																														.	.	.	.	.	.	.	.	.	.															.	.	.	.
Query Sequence		N	A	K	L	K	T	F	I	R	D	L	K	P	V	V	E	M	G	P	D	A	L	I	M	S	D	P	G	.	.	.	.	.	.	.	.	.	.	L	I	M	L	V	R	E	H	F	P	E	M	P	I	.	.	.	.	H	L	S	V	Q	A	N	A	V	N	W	A	T	V	K	F	W	Q	Q	M	G	L	T	R
Query Conservation																														.	.	.	.	.	.	.	.	.	.															.	.	.	.
Alig confidence																														.	.	.	.	.	.	.	.	.	.															.	.	.	.																		.	.	.
Template Conservation																																																																											.	.	.
Template Sequence		P	V	T	P	Q	A	V	A	S	V	T	E	Q	L	F	S	L	G	C	H	E	V	S	L	G	D	T	I	G	R	G	T	P	D	T	V	A	A	X	L	D	A	V	L	A	I	A	P	A	H	S	L	A	G	H	Y	H	D	T	G	G	R	A	L	D	N	I	R	V	S	L	E	K	.	.	.	G	L	R	V
Template Known Secondary structure																			T		S							T	T	S																T	T	S		G	G	G						B		T	T	S													.	.	.	T
Template Predicted Secondary structure																																																																											.	.	.
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.				.	.	.	.
		138	.	140	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	L	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	D	A	S
Template Known Secondary structure					B
Template Predicted Secondary structure
Template SS confidence
		228	.	230	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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