Job Description P76403 Confidence 94.42% Date Thu Jan 5 12:22:42 GMT 2012 Rank 169 Aligned Residues 192 % Identity 22% Template c1x7fA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:outer surface protein; PDBTitle: crystal structure of an uncharacterized b. cereus protein Resolution 2.30 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	K	N	M	R	Y	A	F	A	Y	G	A	D	A	V	Y	A	G	Q	P	R	Y	S	L	R	V	R	N	N	E	F	N	H	E	N	L	Q	L	G	I	N	E	A	H	A	L	G	K	K	F	Y	V	V	V	N	I	A	P	H	N	A	K	L	K	T	F	I	R	D	L	K	P	V	V	E	M	G	P	D
Query Conservation
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.
Template Conservation																						.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.
Template Sequence		D	M	A	Y	I	S	A	A	A	R	H	G	F	S	R	I	F	T	C	L	.	.	.	.	.	.	.	.	.	.	.	L	S	V	A	E	F	K	E	I	I	N	H	A	K	D	N	N	M	E	V	I	L	D	V	A	P	A	V	F	.	.	.	.	.	.	.	Y	S	D	L	S	F	F	A	E	L	G	A	D
Template Known Secondary structure											T	T	T									.	.	.	.	.	.	.	.	.	.	.																T	T									T	T			.	.	.	.	.	.	.				T							T		S
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.												.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.								.	.	70	.	.	.	.	.	.	.	.	.	80
		92	.	.	.	.				.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.													140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure							.	.	.																																												.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence							.	.	.																																												.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	L	I	M	S	.	.	.	D	P	G	L	I	M	L	V	R	E	H	F	P	E	M	P	I	H	L	S	V	Q	A	N	A	V	N	W	A	T	V	K	F	W	Q	Q	M	G	L	T	R	V	I	.	.	.	.	.	.	.	.	.	.	.	.	L	S	R	E	L	S	L	E	E	I	E	E	I	R	N	Q	V
Query Conservation							.	.	.																																												.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.																										.																		.	.	.	.	.	.	.	.	.	.	.	.																	.
Template Conservation																																			.																																														.
Template Sequence		G	I	R	L	D	V	G	F	D	G	L	T	E	A	K	M	T	N	N	P	Y	G	L	K	I	E	L	N	V	S	N	D	I	.	A	Y	L	E	N	I	L	S	H	Q	A	N	K	S	A	L	I	G	C	H	N	F	Y	P	Q	K	F	T	G	L	P	Y	D	Y	F	I	R	C	S	E	R	F	K	K	H	.
Template Known Secondary structure						S	S			S	S							T	T		T	T								T	T	S		S	.	S						T	T	S	S			G	G	G								B		S	T	T		S	B															T	.
Template Predicted Secondary structure																																			.																																														.
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.		.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	D	M	E	I	E	I	F	V	H	G	A	L	C	M	A	Y	S	G	R	C	L	L	S	G	Y	I	N	K	R	D	P	N	Q	G	T	C	T	N	A	C	R	W	E	Y	N	V	Q	E	G	K	E	D	D	V	G	N	I	V	H	K	Y	E	P	I	P	V	Q	N	V	E	P	T	L	G	I	G	A	P	T
Query Conservation
Alig confidence		.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.
Template Conservation		.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.
Template Sequence		.	G	I	R	S	A	A	F	I	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	V	A	N	I	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	W	D	I	N	D	G	L	C	T	L	E	E	.	.	.	.
Template Known Secondary structure		.	T										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S			B		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	S			S			B	S	B	G	G	.	.	.	.
Template Predicted Secondary structure		.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.
Template SS confidence
			173	.	.	.	.	.	.	180	.	.																			.	.	.	.	.	.																													.	190	.	.	.	.	.	.	.	.	.	200	.
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.		.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
Predicted Secondary structure																																																.
Query SS confidence																																																.
Query Sequence		D	K	V	F	M	I	E	E	A	Q	R	P	G	E	Y	M	T	A	F	E	D	E	H	G	T	Y	I	M	N	S	K	D	L	R	A	I	A	H	V	E	R	L	T	K	M	G	.	V	H	S	L	K	I	E	G	R	T	K	S	F	Y	Y	C	A	R	T	A	Q
Query Conservation																																																.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	R	N	L	P	I	E	V	Q	A	K	H	L	W	A	T	G	L	I	D	D	V	I	I	G	N	A	Y	A	S	E	E	E	L	E	K	L	G	N
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	T	T	S												T	T	S								S	B
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																															202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions