Job Description P76403 Confidence 76.86% Date Thu Jan 5 12:22:42 GMT 2012 Rank 433 Aligned Residues 50 % Identity 16% Template c1ud8A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:amylase; PDBTitle: crystal structure of amyk38 with lithium ion Resolution 2.88 Å

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40							.	.	.																		.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.	.				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	N	M	R	Y	A	F	A	Y	G	A	D	A	V	Y	A	G	Q	P	R	Y	S	L	R	V	R	N	.	.	.	.	.	.	N	E	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	H	E	N	L	Q	L	G	I	N	E	A	H	A	L	G	K	K	F	Y	V
Query Conservation																													.	.	.	.	.	.				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.											.	.	.	.	.	.				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.
Template Sequence		D	D	A	A	A	L	S	D	A	G	I	T	A	I	W	I	.	P	P	A	Y	K	G	N	S	Q	A	D	V	G	Y	G	A	Y	D	L	Y	D	L	G	E	F	N	Q	K	G	T	V	R	T	K	Y	G	T	K	A	Q	L	E	R	A	I	G	S	L	K	S	N	D	I	N	V	Y	G
Template Known Secondary structure											T							.				S			S	S	T	T			S	S	S				T	T		S	S		S		B	T	T	B	S	S		S	S																T	T
Template Predicted Secondary structure																		.
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.		.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions