Job Description P76403 Confidence 89.57% Date Thu Jan 5 12:22:42 GMT 2012 Rank 313 Aligned Residues 105 % Identity 24% Template c1jibA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:neopullulanase; PDBTitle: complex of alpha-amylase ii (tva ii) from thermoactinomyces2 vulgaris r-47 with maltotetraose based on a crystal soaked3 with maltohexaose. Resolution 3.30 Å

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		11	.	.	.	.	.	.	.	.	20	.	.					.	.	.	.	.	.	.	30	.				.	.	.	.	.	.	.	.	40	.	.	.									.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.			.	.	.	.	.	70	.	.	.
Predicted Secondary structure														.	.	.	.										.	.	.													.	.	.	.	.	.	.	.																						.	.
Query SS confidence														.	.	.	.										.	.	.													.	.	.	.	.	.	.	.																						.	.
Query Sequence		G	T	L	K	N	M	R	Y	A	F	A	Y	.	.	.	.	G	A	D	A	V	Y	A	G	Q	.	.	.	P	R	Y	S	L	R	V	R	N	N	E	F	.	.	.	.	.	.	.	.	N	H	E	N	L	Q	L	G	I	N	E	A	H	A	L	G	K	K	F	Y	V	.	.	V	V	N	I	A	P	H	N	A
Query Conservation														.	.	.	.										.	.	.													.	.	.	.	.	.	.	.																						.	.
Alig confidence														.	.	.	.										.	.	.													.	.	.	.	.	.	.	.																						.	.
Template Conservation
Template Sequence		G	D	L	K	G	V	I	D	R	L	P	Y	L	E	E	L	G	V	T	A	L	Y	F	T	P	I	F	A	S	P	S	H	H	K	Y	D	T	A	D	Y	L	A	I	D	P	Q	F	G	D	L	P	T	F	R	R	L	V	D	E	A	H	R	R	G	I	K	I	I	L	D	A	V	F	N	H	A	G	D	Q	F
Template Known Secondary structure										T								T		S											S	S	S	S			S		S							T	T	T															T	T	T										S	B			T	T	S
Template Predicted Secondary structure
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
		74	.																																																						.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.
Query SS confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.
Query Sequence		K	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	T	F	I	R	D	L	K	P	V	V	E	M	G	P	D	A	L	I	M	S	D	P	.	.
Query Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.
Template Conservation
Template Sequence		F	A	F	R	D	V	L	Q	K	G	E	Q	S	R	Y	K	D	W	F	F	I	E	D	F	P	V	S	K	T	S	R	T	N	Y	E	T	F	A	V	Q	V	P	A	M	P	K	L	R	T	E	N	P	E	V	K	E	Y	L	F	D	V	A	R	F	W	M	E	Q	G	I	D	G	W	R	L	N	V	A	N	E
Template Known Secondary structure											G	G	G		T	T	G	G	G	S		B		S	S	S				S	S	S		S	B		B	S	S	S	S		T	T		B	B			T	T	S																T	T	T							T	T	G	G	G
Template Predicted Secondary structure
Template SS confidence
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.
									99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	G	L	I	M	L	V	R	E	H	F	P	E	M	P	I	H	L
Query Conservation		.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	D	H	A	F	W	R	E	F	R	R	L	V	K	S	L	N	P	D	A	L	I	V	G
Template Known Secondary structure		S																	T	T
Template Predicted Secondary structure
Template SS confidence
		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions