Job Description P76403 Confidence 84.50% Date Thu Jan 5 12:22:42 GMT 2012 Rank 374 Aligned Residues 105 % Identity 20% Template c1gviA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:maltogenic amylase; PDBTitle: thermus maltogenic amylase in complex with beta-cd Resolution 3.3 Å

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		11	.	.	.	.	.	.	.	.	20	.	.					.	.	.	.	.	.	.											30	.	.	.	.	.	.	.	.	.	40	.	.	.		.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.								.	.	.	.	.	.	.	.	.	.															.																									.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.								.	.	.	.	.	.	.	.	.	.															.																									.	.	.	.	.	.	.	.
Query Sequence		G	T	L	K	N	M	R	Y	A	F	A	Y	.	.	.	.	G	A	D	A	V	Y	A	.	.	.	.	.	.	.	.	.	.	G	Q	P	R	Y	S	L	R	V	R	N	N	E	F	.	N	H	E	N	L	Q	L	G	I	N	E	A	H	A	L	G	K	K	F	Y	V	V	V	N	.	.	.	.	.	.	.	.
Query Conservation														.	.	.	.								.	.	.	.	.	.	.	.	.	.															.																									.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.								.	.	.	.	.	.	.	.	.	.															.																									.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	D	L	Q	G	I	I	D	H	L	D	Y	L	A	D	L	G	I	T	G	I	Y	L	T	P	I	F	R	A	P	S	N	H	K	Y	D	T	A	D	Y	F	E	I	D	P	H	F	G	D	K	E	T	L	K	T	L	V	K	R	C	H	E	K	G	I	R	V	M	L	D	A	V	F	N	H	C	G	Y	E	F
Template Known Secondary structure										T								T										B	S		S	S	S	S	T	T	S		S		T	T	S	B		T	T	T																	T										S	B			T	T
Template Predicted Secondary structure
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
																																																68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.		.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	A	P	H	N	A	K	L	K	T	F	I	R	D	L	K	P	V	V	.	E	M	G	P	D	A	L	I	M	S	D	P	G	L
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Template Conservation
Template Sequence		A	P	F	Q	D	V	L	K	N	G	A	A	S	R	Y	K	D	W	F	H	I	R	E	F	P	L	Q	T	E	P	R	P	N	Y	D	T	F	A	F	V	P	H	M	P	K	L	N	T	A	H	P	E	V	K	R	Y	L	L	D	V	A	T	Y	W	I	R	E	F	D	I	D	G	W	R	L	D	V	A	N	E
Template Known Secondary structure											G	G	G		T	T	G	G	G	B		B	S	S	S	S				S	S	S		S	B		B	S	S	S		T	T	S	B	B	B		T	T	S																		S								T	T	G	G	G
Template Predicted Secondary structure
Template SS confidence
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.
		101										.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure			.	.	.	.	.	.	.	.	.
Query SS confidence			.	.	.	.	.	.	.	.	.
Query Sequence		I	.	.	.	.	.	.	.	.	.	M	L	V	R	E	H	F	P	E	M	P	I	H	L
Query Conservation			.	.	.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	D	H	Q	F	W	R	E	F	R	Q	A	V	K	A	L	K	P	D	V	Y	I	L	G
Template Known Secondary structure		S																	T	T
Template Predicted Secondary structure
Template SS confidence
		333	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions