Return to main results Retrieve Phyre Job Id

Job DescriptionP76403
Confidence76.52%DateThu Jan 5 12:22:42 GMT 2012
Rank435Aligned Residues121
% Identity15%Templatec1gthD_
PDB info PDB header:oxidoreductaseChain: D: PDB Molecule:dihydropyrimidine dehydrogenase; PDBTitle: dihydropyrimidine dehydrogenase (dpd) from pig, ternary2 complex with nadph and 5-iodouracil
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   13......20.........30.........40.. .......50... ......60.........70.........80......
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Query Sequence  LKNMRYAFAYGADAVYAGQPRYSLRVRNNE. . . . . FNHENLQLGIN. EAHALGKKFYVVVNIAPHNAKLKTFIRDLKPVV
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Template Sequence  MELSRKAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAVQIPFFAKLTPNVTD. . . . . IVSIARAAK
Template Known Secondary structure  TT
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SSGGGGT
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   651........660.........670.........680.........690.........700.........710...... ...720.....
 
   87..90....... ..100.........110.........120........
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Query Sequence  EMGPDALIMSD. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . PGLIMLVREHFPEMPIHLSVQANAVNWATVK
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Template Sequence  EGGADGVTATNTVSGLMGLKADGTPWPAVGAGKRTTYGGVSGTAIRPIALRAVTTIARALPGFPILATGG. . IDSAESGL
Template Known Secondary structure  T
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B
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BTTTTB


SGGGSTT

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   726...730.........740.........750.........760.........770.........780.........790..... ....800...
 
   129130.........140
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Query Sequence  FWQQMGLTRVIL
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Template Sequence  QFLHSGASVLQV
Template Known Secondary structure  TT
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   804.....810.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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