Job Description P76403 Confidence 94.26% Date Thu Jan 5 12:22:42 GMT 2012 Rank 176 Aligned Residues 85 % Identity 22% Template c1cygA_ PDB info PDB header:glycosyltransferase Chain: A: PDB Molecule:cyclodextrin glucanotransferase; PDBTitle: cyclodextrin glucanotransferase (e.c.2.4.1.19) (cgtase) Resolution 2.50 Å

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		11	.	.	.	.	.	.	.	.	20	.							.	.	.	.	.	.	.	.																						30	.	.	.	.	.	.	.	.	.	40	.	.	.		.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.
Predicted Secondary structure													.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.
Query SS confidence													.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.
Query Sequence		G	T	L	K	N	M	R	Y	A	F	A	.	.	.	.	.	.	Y	G	A	D	A	V	Y	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	Q	P	R	Y	S	L	R	V	R	N	N	E	F	.	N	H	E	N	L	Q	L	G	I	N	E	A	H	A	L	G	K	K	F
Query Conservation													.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.
Alig confidence													.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.
Template Conservation
Template Sequence		G	D	W	Q	G	I	I	N	K	I	N	D	G	Y	L	T	D	M	G	V	T	A	I	W	I	S	Q	P	V	E	N	V	F	S	V	M	N	D	A	S	G	S	A	S	Y	H	G	Y	W	A	R	D	F	K	K	P	N	P	F	F	G	T	L	S	D	F	Q	R	L	V	D	A	A	H	A	K	G	I	K	V
Template Known Secondary structure													T	S	T	T	T	T	T	T																		S	S	S	S				S	T	T	S		S									T	T	T																T	T
Template Predicted Secondary structure
Template SS confidence
		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
		63	.	.	.																																																																.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	V	V	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	I	A	P	H	N	A	K	L	K	T	F	I
Query Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	I	D	F	A	P	N	H	T	S	P	A	S	E	T	N	P	S	Y	M	E	N	G	R	L	Y	D	N	G	T	L	L	G	G	Y	T	N	D	A	N	M	Y	F	H	H	N	G	G	T	T	F	S	S	L	E	D	G	I	Y	R	N	L	F	D	L	A	D	L	N	H	Q	N	P	V	I	D	R	Y	L	K
Template Known Secondary structure							T	T							S	S		T	T	S	T	T	T	T					T	T						S	T	T		T	T			B			S		B				S	S						S	S	B	S	T	T				B		T	T	S
Template Predicted Secondary structure
Template SS confidence
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	D	L	K	P	V	V	E	M	G	P	D	A	L	I	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	A	V	K	M	W	I	D	M	G	I	D	G	I	R	M
Template Known Secondary structure									T	T	T
Template Predicted Secondary structure
Template SS confidence
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions