Job Description P0AFS9 Confidence 46.02% Date Thu Jan 5 11:27:10 GMT 2012 Rank 88 Aligned Residues 49 % Identity 14% Template c3trzE_ PDB info PDB header:rna binding protein/rna Chain: E: PDB Molecule:protein lin-28 homolog a; PDBTitle: mouse lin28a in complex with let-7d microrna pre-element Resolution 2.90 Å

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		331	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.						.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380
Predicted Secondary structure																								.	.	.	.	.
Query SS confidence																								.	.	.	.	.
Query Sequence		G	D	G	E	V	V	V	A	K	R	S	G	A	A	G	Y	Y	V	A	I	R	H	.	.	.	.	.	G	R	S	Y	T	T	R	Y	M	H	L	R	K	I	L	V	K	P	G	Q	K	V	K	R	G	D	R	I
Query Conservation																								.	.	.	.	.
Alig confidence																	.							.	.	.	.	.
Template Conservation																	.
Template Sequence		G	A	G	I	C	K	W	F	N	V	R	M	G	F	G	.	F	L	S	M	T	A	R	A	G	V	A	L	D	P	P	V	D	V	F	V	H	Q	S	K	L	H	M	E	G	F	R	S	L	K	E	G	E	A	V
Template Known Secondary structure											T	T	T	T			.								T	T													G	G	G	B			S	S	S					T	T
Template Predicted Secondary structure																	.
Template SS confidence
		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.		.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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