Return to main results Retrieve Phyre Job Id

Job DescriptionP0AFS9
Confidence41.52%DateThu Jan 5 11:27:10 GMT 2012
Rank95Aligned Residues54
% Identity20%Templatec3a5dB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:v-type atp synthase alpha chain; PDBTitle: inter-subunit interaction and quaternary rearrangement2 defined by the central stalk of prokaryotic v1-atpase
Resolution4.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   330.........340.........350.........360......
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Query Sequence  VGDGEVVVAKRSGAAGYYVAIRHGRSYTTRYMHLRKI. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  ARMYDICKVGEEGLVGEIIRLDGDTAFVQVYEDTSGLKVGEPVVSTGLPLAVELGPGMLNGIYDGIQRPLVHALDREKKW
Template Known Secondary structure  T

TT
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GGG

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   22.......30.........40.........50.........60.........70.........80.........90.........100.
 
   367..370.........380...
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Query Sequence  . . . . LVKPGQKVKRGDRIALS
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Template Sequence  AWTPMVKPGDEVRGGMVLGTV
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TT

TT
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   118.120.........130........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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