Job Description P0AFS9 Confidence 69.21% Date Thu Jan 5 11:27:10 GMT 2012 Rank 65 Aligned Residues 64 % Identity 19% Template c2vbcA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:dengue 4 ns3 full-length protein; PDBTitle: crystal structure of the ns3 protease-helicase from dengue2 virus Resolution 3.15 Å

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		317	.	.		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.					.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.
Predicted Secondary structure					.																																														.	.	.	.
Query SS confidence					.																																														.	.	.	.
Query Sequence		V	D	F	.	A	M	P	Q	G	T	P	V	L	S	V	G	D	G	E	V	V	V	A	K	R	S	G	A	A	G	Y	Y	V	A	I	R	H	G	R	S	Y	T	T	R	Y	M	H	L	R	.	.	.	.	K	I	L	V	K	P	G	Q	K	V	K	R	G	D	R	I	A	L	S	G	N	T	G
Query Conservation					.																																														.	.	.	.
Alig confidence					.										.										.	.	.	.	.												.										.	.	.	.
Template Conservation															.										.	.	.	.	.												.
Template Sequence		L	D	F	K	P	G	T	S	G	S	P	I	I	.	N	K	K	G	K	V	I	G	L	.	.	.	.	.	Y	G	N	G	V	V	T	K	S	G	D	.	Y	V	S	A	I	T	Q	A	E	R	I	G	E	P	D	Y	E	V	D	E	D	I	F	R	K	K	R	L	T	I	M	D	L	H	P	G
Template Known Secondary structure						T	T		T	T					.		S	S	S	S					.	.	.	.	.								S	S	S	S	.													S											S	T	T									T	T
Template Predicted Secondary structure															.										.	.	.	.	.												.
Template SS confidence
		128	.	130	.	.	.	.	.	.	.	.	.	140		.	.	.	.	.	.	.	.	.						150	.	.	.	.	.	.	.	.	.	160		.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions