Job Description P0AFS9 Confidence 100.00% Date Thu Jan 5 11:27:10 GMT 2012 Rank 1 Aligned Residues 318 % Identity 42% Template c2gu1A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:zinc peptidase; PDBTitle: crystal structure of a zinc containing peptidase from2 vibrio cholerae Resolution 1.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130				.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure																																					.	.	.
Query SS confidence																																					.	.	.
Query Sequence		H	E	Y	V	V	S	T	G	D	T	L	S	S	I	L	N	Q	Y	G	I	D	M	G	D	I	T	Q	L	A	A	A	D	K	E	L	.	.	.	R	N	L	K	I	G	Q	Q	L	S	W	T	L	T	A	D	G	E	L	Q	R	L	T	W	E	V	S	R	R	E	T	R	T	Y	D	R	T	A	A	N	G	F
Query Conservation																																					.	.	.
Alig confidence																																					.	.	.
Template Conservation
Template Sequence		I	H	Y	M	V	K	V	G	D	T	L	S	G	I	F	A	Q	L	G	V	P	Y	S	I	L	Q	K	I	L	S	V	D	L	D	H	L	Q	L	D	M	I	Q	P	G	E	E	L	E	L	M	M	D	D	M	G	Q	L	S	R	L	I	Y	H	M	S	I	V	E	K	A	I	Y	T	R	E	N	D	G	S	F
Template Known Secondary structure								T	T										T	T													G	G	G	T			G	G	G			T	T									T	T	S											T	T									T	T	S
Template Predicted Secondary structure
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.		.	.	.	.	.	250	.
Predicted Secondary structure																																																																										.
Query SS confidence																																																																										.
Query Sequence		K	M	T	S	E	M	Q	Q	G	E	W	V	N	N	L	L	K	G	T	V	G	G	S	F	V	A	S	A	R	N	A	G	L	T	S	A	E	V	S	A	V	I	K	A	M	Q	W	Q	M	D	F	R	K	L	K	K	G	D	E	F	A	V	L	M	S	R	E	M	L	D	G	K	.	R	E	Q	S	Q	L	L
Query Conservation																																																																										.
Alig confidence																																																																										.
Template Conservation
Template Sequence		S	Y	D	F	Q	E	I	S	G	E	W	R	E	I	L	F	S	G	E	I	N	G	S	F	S	V	S	A	R	R	V	G	L	T	S	S	Q	V	A	N	I	T	Q	V	M	K	D	K	I	D	F	S	R	S	L	R	A	D	R	F	D	I	L	V	K	Q	Q	Y	L	G	E	H	N	T	G	N	S	E	I	K
Template Known Secondary structure																					S	S	S									T	T														T	T	T			T	T	T																	T	T
Template Predicted Secondary structure
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.		.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
Predicted Secondary structure																																												.
Query SS confidence																																												.
Query Sequence		G	V	R	L	R	S	E	G	K	D	Y	Y	A	I	R	A	E	D	G	K	F	Y	D	R	N	G	T	G	L	A	K	G	F	L	R	F	P	T	A	K	Q	F	.	R	I	S	S	N	F	N	P	R	R	T	N	P	V	T	G	R	V	A	P	H	R	G	V	D	F	A	M	P	Q	G	T	P	V	L	S	V
Query Conservation																																												.
Alig confidence																																												.
Template Conservation
Template Sequence		A	I	S	F	K	L	A	K	G	D	V	S	A	F	L	A	E	D	G	R	F	Y	D	R	A	G	N	S	L	E	R	A	F	N	R	Y	P	V	D	K	A	Y	R	Q	I	T	S	G	F	N	P	K	R	K	H	P	V	T	G	R	V	V	P	H	N	G	T	D	F	A	T	P	I	G	A	P	V	Y	S	T
Template Known Secondary structure								T	T									T	T	S					T	T	S		B	S	S					S		S	S		G	G	G								B	T	T		B		T	T	T			B			B		S							T	T						S
Template Predicted Secondary structure
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
		331	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410
Predicted Secondary structure
Query SS confidence
Query Sequence		G	D	G	E	V	V	V	A	K	R	S	G	A	A	G	Y	Y	V	A	I	R	H	G	R	S	Y	T	T	R	Y	M	H	L	R	K	I	L	V	K	P	G	Q	K	V	K	R	G	D	R	I	A	L	S	G	N	T	G	R	S	T	G	P	H	L	H	Y	E	V	W	I	N	Q	Q	A	V	N	P	L	T	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	D	G	K	V	I	V	V	R	K	H	P	Y	A	G	N	Y	L	V	I	E	H	N	S	V	Y	K	T	R	Y	L	H	L	D	K	I	L	V	K	K	G	Q	L	V	K	R	G	Q	K	I	A	L	A	G	A	T	G	R	L	T	G	P	H	L	H	F	E	V	L	V	R	N	R	P	V	D	A	M	K	A
Template Known Secondary structure		S	S										T	T	T									S	S	S									S						T	T					T	T										S	S		S	S										T	T					T	T		S
Template Predicted Secondary structure
Template SS confidence
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
		411	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	L	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	L	P
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		329	330	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions