Job Description P0AFS9 Confidence 75.64% Date Thu Jan 5 11:27:10 GMT 2012 Rank 55 Aligned Residues 82 % Identity 17% Template c2e75C_ PDB info PDB header:photosynthesis Chain: C: PDB Molecule:apocytochrome f; PDBTitle: crystal structure of the cytochrome b6f complex with 2-nonyl-4-2 hydroxyquinoline n-oxide (nqno) from m.laminosus Resolution 3.55 Å

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		298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.		.	.	.				.	.	.	.	.	350	.	.	.	.	.				.	.	.	.	360	.	.	.	.	.	.	.	.	.	370
Predicted Secondary structure																																														.				.	.	.												.	.	.
Query SS confidence																																														.				.	.	.												.	.	.
Query Sequence		N	F	N	P	R	R	T	N	P	V	T	G	R	V	A	P	H	R	G	V	D	F	A	M	P	Q	G	T	P	V	L	S	V	G	D	G	E	V	V	V	A	K	R	S	.	G	A	A	.	.	.	G	Y	Y	V	A	I	R	H	G	R	S	.	.	.	Y	T	T	R	Y	M	H	L	R	K	I	L	V	K	P
Query Conservation																																														.				.	.	.												.	.	.
Alig confidence																																														.				.	.	.												.	.	.												.
Template Conservation																																																																														.
Template Sequence		H	F	G	K	Y	A	I	H	L	G	A	N	R	G	R	G	Q	I	Y	P	T	G	E	K	S	N	N	N	V	F	T	A	S	A	T	G	T	I	T	K	I	A	K	E	E	D	E	Y	G	N	V	K	Y	Q	V	S	I	Q	T	D	S	G	K	T	V	V	D	T	I	P	A	G	P	E	L	I	.	V	S	E
Template Known Secondary structure															S			S	B		T	T	S		B		S	S	S					S	S	S			B									S	S	S							B	B		S	T	T	S				B					S	S	S				.			S
Template Predicted Secondary structure																																																																														.
Template SS confidence
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.		.	220	.
		371	.	.	.	.	.	.	.	.	380
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Q	K	V	K	R	G	D	R	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	Q	A	V	K	A	G	E	A	L
Template Known Secondary structure		S					T	T			T
Template Predicted Secondary structure
Template SS confidence
		222	.	.	.	.	.	.	.	230	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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