Job Description P0AFS9 Confidence 88.22% Date Thu Jan 5 11:27:10 GMT 2012 Rank 31 Aligned Residues 49 % Identity 37% Template c2dsjA_ PDB info PDB header:transferase Chain: A: PDB Molecule:pyrimidine-nucleoside (thymidine) phosphorylase; PDBTitle: crystal structure of project id tt0128 from thermus thermophilus hb8 Resolution 1.80 Å

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		326	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.													.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	V	L	S	V	G	D	G	E	V	V	V	A	K	R	S	G	A	A	G	Y	Y	V	.	.	.	.	.	.	.	.	.	.	.	.	A	I	R	H	G	R	S	Y	T	T	R	Y	M	H	L	R	K	I	L	V	K	P	G	Q	K	V	K	R	G	D	R	I	A	L	S
Query Conservation																									.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.								.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.
Template Conservation																	.																													.	.	.	.	.	.	.	.
Template Sequence		P	L	R	A	E	R	E	G	V	V	R	E	V	D	A	.	Y	K	V	G	L	A	V	L	A	L	G	G	G	R	K	R	K	G	E	P	I	D	H	G	V	G	V	Y	.	.	.	.	.	.	.	.	L	L	K	K	P	G	D	R	V	E	R	G	E	A	L	A	L	V
Template Known Secondary structure						S	S										.											T	S	S		S	S	T	T					T	T					.	.	.	.	.	.	.	.		S			T	T					T	T	S
Template Predicted Secondary structure																	.																													.	.	.	.	.	.	.	.
Template SS confidence
		329	330	.	.	.	.	.	.	.	.	.	340	.	.	.		.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.									.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions