Job Description P0AFS9 Confidence 90.75% Date Thu Jan 5 11:27:10 GMT 2012 Rank 24 Aligned Residues 81 % Identity 17% Template c1q90A_ PDB info PDB header:photosynthesis Chain: A: PDB Molecule:apocytochrome f; PDBTitle: structure of the cytochrome b6f (plastohydroquinone : plastocyanin2 oxidoreductase) from chlamydomonas reinhardtii Resolution 3.10 Å

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		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.			340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.				.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.
Predicted Secondary structure																																											.	.																	.	.	.
Query SS confidence																																											.	.																	.	.	.
Query Sequence		F	N	P	R	R	T	N	P	V	T	G	R	V	A	P	H	R	G	V	D	F	A	M	P	Q	G	T	P	V	L	S	V	G	D	G	E	V	V	V	A	K	.	.	R	S	G	A	A	G	Y	Y	V	A	I	R	H	G	R	S	.	.	.	Y	T	T	R	Y	M	H	L	R	K	I	L	V	K	P	G	Q	K
Query Conservation																																											.	.																	.	.	.
Alig confidence																																											.	.																	.	.	.												.
Template Conservation																																																																											.
Template Sequence		Y	L	K	Y	P	I	Y	F	G	G	N	R	G	R	G	Q	V	Y	P	D	G	K	K	S	N	N	T	I	Y	N	A	S	A	A	G	K	I	V	A	I	T	A	L	S	E	K	K	G	G	F	E	V	S	I	E	K	A	N	G	E	V	V	V	D	K	I	P	A	G	P	D	L	I	.	V	K	E	G	Q	T
Template Known Secondary structure		S												S			S			T	T	S				T	T	S			B		S	S	S											T	T	T										S	S	S									S	S	S		B		.			T	T
Template Predicted Secondary structure																																																																											.
Template SS confidence
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.		.	.	.	.	220	.
		374	.	.	.	.	.	380
Predicted Secondary structure
Query SS confidence
Query Sequence		V	K	R	G	D	R	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	Q	A	D	Q	P	L
Template Known Secondary structure				T	T		B	S
Template Predicted Secondary structure
Template SS confidence
		222	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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