Job Description Q47269 Confidence 11.04% Date Thu Jan 5 12:36:41 GMT 2012 Rank 16 Aligned Residues 59 % Identity 19% Template d1bvp11 SCOP info A virus capsid protein alpha-helical domain A virus capsid protein alpha-helical domain Orbivirus capsid Resolution 2.60

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	Q	D	G	I	K	L	H	R	G	N	F	T	A	I	G	R	Q	I	Q	P	Y	L	E	E	G	K	C	F	R	M	V	L	K	P	W	R	E	K	R	S	L	S	Q	N	A	L	S	H	M	W	Y	S	E	I	S	E	Y	L	I	S	R	G	K	T	F	A	T	P	A	W	V	K	D	A	L	K	H	T
Query Conservation
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.													.	.	.	.	.								.
Template Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.													.	.	.	.	.								.
Template Sequence		L	A	T	P	E	I	P	F	T	T	E	A	A	N	E	I	A	R	V	T	G	E	T	S	T	W	G	.	.	.	.	.	.	.	.	.	.	.	.	.	K	T	L	N	Q	.	.	.	Y	P	A	L	T	A	E	I	F	N	V	Y	.	.	.	.	.	S	F	R	D	H	T	W	.	H	G	L	R	T	A	I
Template Known Secondary structure			T		T	T	S																		T	S			.	.	.	.	.	.	.	.	.	.	.	.	.			T	T	S	.	.	.	S	T	T										.	.	.	.	.			S	S				.
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.													.	.	.	.	.								.
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120														.	.	.	.	.				.	.	.	.	130	.	.	.	.	.	.	.						.	.	140	.	.	.	.		.	.	.	.	.	150	.
		83
Predicted Secondary structure
Query SS confidence
Query Sequence		Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		286

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions