 |
Job Description | Q47269 | Confidence | 2.69% | Date | Thu Jan 5 12:36:41 GMT 2012 |
Rank | 90 | Aligned Residues | 66 |
% Identity | 12% | Template | c3gzaB_ |
PDB info |
PDB header:hydrolase | Chain: B: PDB Molecule:putative alpha-l-fucosidase; |
PDBTitle: crystal structure of putative alpha-l-fucosidase (np_812709.1) from2 bacteroides thetaiotaomicron vpi-5482 at 1.60 a resolution
|
Resolution | 1.60 Å |
|
 |
  |   |
67 | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
. | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |
|
|  |  |  | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | T | F | A | T | P | A | W | V | K | D | A | L | K | H | T | Y | L | G | Y | E | T | K | D | L | V | D | V | V | T | G | D | I | T | T | I | Q | S | L | R | H | T | S | D | L | D | T | G | E | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
M | Y | V | F | L | C | K | V | E | A | W | A | M | N | I | G | C | H | L | T | I |
Query Conservation |   |
  |   |   |   |   |   |   |
|   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|
|
|   |
|   |   |
|
| . | . | . | . | . | . | . | . | . | . |
|
|   |   |
|
|   |
|   |
|   |   |   |
|   |
|
|   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|
|   |
|
| . | . | . | . | . |
|   |   |   |
|   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |
|
|   |
|
|   |
|   |   |   |
|   |   |
|
|   |   |   |   |
|   |
|
|
|   |
|
|   |   |
|   |
|
|   |
|
|
|   |
|   |
|   |
|   |
Template Sequence |   |
T | E | L | N | T | D | Q | W | . |
. |
. |
. |
. |
V | Q | A | A | K | A | A | G | C | K | F | A | V | L | T | A | T | H | E | T | G | F | G | L | W | Q | S | D | V | N | P | Y | C | L | K | A | V | K | W | R | D | G | K | G | D | I | V | R | D | F | V | N | S | C | R | K | Y | G | L | Q | P | G | I | Y | I | G | I |
Template Known Secondary structure |   |
T | T |
|
|  |  |  |  | . | . | . | . | . |  |  |  |  |  | T | T | T |
|
|  |  |  |  |  |  |  |
| S | S |
|
| B | S | S |
|
| S | S |
| S | S | B | G | G | G | S | S | G | G | G | G | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  | T |
|  |  |  |  |  |  |
|
|
Template Predicted Secondary structure |   |
 |  |
|
|  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
74 | . | . | . | . | . | 80 | . | |
|
|
|
|
. | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . |
  |
  |   |
137 |
Predicted Secondary structure |   |
|
Query SS confidence |   |
|
Query Sequence |   |
P |
Query Conservation |   |
|
Alig confidence |   |
|
Template Conservation |   |
  |
Template Sequence |   |
R |
Template Known Secondary structure |   |
S |
Template Predicted Secondary structure |   |
|
Template SS confidence |   |
|
  |   |
149 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|