Job Description P06721 Confidence 99.92% Date Wed Jan 25 15:20:11 GMT 2012 Rank 173 Aligned Residues 315 % Identity 12% Template d2q7wa1 SCOP info PLP-dependent transferase-like PLP-dependent transferases AAT-like Resolution 1.40

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		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.									.	.	.	.	80	.	.			.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure																															.																	.	.	.	.	.	.	.	.								.	.																.	.
Query SS confidence																															.																	.	.	.	.	.	.	.	.								.	.																.	.
Query Sequence		A	S	S	L	V	F	D	S	V	E	A	K	K	H	A	T	R	N	R	A	N	G	E	L	F	Y	G	R	R	.	G	T	L	T	H	F	S	L	Q	Q	A	M	C	E	L	E	.	.	.	.	.	.	.	.	G	G	A	G	C	V	L	.	.	F	P	C	G	A	A	A	V	A	N	S	I	L	A	F	.	.
Query Conservation																															.																	.	.	.	.	.	.	.	.								.	.																.	.
Alig confidence																								.							.				.	.	.											.	.	.	.	.	.	.	.								.	.																.	.
Template Conservation																								.											.	.	.
Template Sequence		G	K	T	P	V	L	T	S	V	K	K	A	E	Q	Y	L	L	E	N	E	T	T	.	K	N	Y	L	G	I	D	G	I	P	.	.	.	E	F	G	R	C	T	Q	E	L	L	F	G	K	G	S	A	L	I	N	D	K	R	A	R	T	A	Q	T	P	G	G	T	G	A	L	R	V	A	A	D	F	L	A	K
Template Known Secondary structure		S																						.						T	T				.	.	.													T	T						T	T								S
Template Predicted Secondary structure																								.											.	.	.
Template SS confidence
		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.		.	.	.	.	.	.	.	70	.	.				.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.								.	.	.	.	140	.	.	.	.	.	.	.	.	.				150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure																																								.	.	.	.	.	.	.															.	.	.
Query SS confidence																																								.	.	.	.	.	.	.															.	.	.
Query Sequence		I	E	Q	G	D	H	V	L	M	T	N	T	A	Y	E	P	S	Q	D	F	C	S	K	I	L	S	K	L	G	V	T	T	S	W	F	D	P	L	.	.	.	.	.	.	.	I	G	A	D	I	V	K	H	L	Q	P	N	T	K	.	.	.	I	V	F	L	E	S	P	G	S	I	T	M	E	V	H	D	V	P
Query Conservation																																								.	.	.	.	.	.	.															.	.	.
Alig confidence																		.	.	.	.																			.	.	.	.	.	.	.															.	.	.
Template Conservation																		.	.	.	.
Template Sequence		N	T	S	V	K	R	V	W	V	S	N	P	S	W	P	N	.	.	.	.	H	K	S	V	F	N	S	A	G	L	E	V	R	E	Y	A	Y	Y	D	A	E	N	H	T	L	D	F	D	A	L	I	N	S	L	N	E	A	Q	A	G	D	V	V	L	F	H	G	C	C	H	N	P	T	G	I	D	P	T	L	E
Template Known Secondary structure			S										S			T		.	.	.	.								T	T											T	T	T	T												T	T			T	T								S	S		T	T	T
Template Predicted Secondary structure																		.	.	.	.
Template SS confidence
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.					.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
		168	.	170	.	.	.	.		.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.										.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.								.	.	.	230
Predicted Secondary structure									.																					.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.
Query SS confidence									.																					.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.
Query Sequence		A	I	V	A	A	V	R	.	S	V	V	P	D	A	I	I	M	I	D	N	T	W	A	A	G	V	L	F	.	.	.	.	.	.	.	.	.	K	A	L	D	F	G	I	D	V	S	I	Q	A	A	T	K	Y	L	V	G	H	S	D	A	M	I	G	T	A	V	C	N	.	.	.	.	.	.	.	A	R	C	W
Query Conservation									.																					.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.
Alig confidence									.																					.	.	.	.	.	.	.	.	.																			.														.	.	.	.	.	.	.
Template Conservation																																																									.
Template Sequence		Q	W	Q	T	L	A	Q	L	S	V	E	K	G	W	L	P	L	F	D	F	A	Y	Q	G	F	A	R	G	L	E	E	D	A	E	G	L	R	A	F	A	A	M	H	K	E	L	I	V	A	S	S	Y	S	N	F	.	G	L	Y	N	E	R	V	G	A	C	T	L	V	A	A	D	S	E	T	V	D	R	A	F
Template Known Secondary structure														T								S		T	T	S	S	S						T											S												.	S		G	G	G										S	S
Template Predicted Secondary structure																																																									.
Template SS confidence
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.		.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure
Query SS confidence
Query Sequence		E	Q	L	R	E	N	A	Y	L	M	G	Q	M	V	D	A	D	T	A	Y	I	T	S	R	G	L	R	T	L	G	V	R	L	R	Q	H	H	E	S	S	L	K	V	A	E	W	L	A	E	H	P	Q	V	A	R	V	N	H	P	A	L	P	G	S	K	G	H	E	F	W	K	R	D	F	T	G	S	S	G	L
Query Conservation
Alig confidence																																						.	.	.	.
Template Conservation																																						.	.	.	.
Template Sequence		S	Q	M	K	A	A	I	R	A	N	Y	S	N	P	P	A	H	G	A	S	V	V	A	T	I	L	S	N	D	A	L	R	A	I	W	E	.	.	.	.	Q	E	L	T	D	M	R	Q	R	I	Q	R	M	R	Q	L	F	V	N	T	L	Q	E	K	G	A	N	R	D	F	S	F	I	I	K	Q	N	G	M	F
Template Known Secondary structure										T	T	T	S	S														T	S									.	.	.	.																								T	T			S			T							S	S
Template Predicted Secondary structure																																						.	.	.	.
Template SS confidence
		273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.					.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.
		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390
Predicted Secondary structure
Query SS confidence
Query Sequence		F	S	F	V	L	K	K	K	L	N	N	E	E	L	A	N	Y	L	D	N	F	S	L	F	S	M	A	Y	S	W	G	G	Y	E	S	L	I	L	A	N	Q	P	E	H	I	A	A	I	R	P	Q	G	E	I	D	F	S	G	T	L	I	R	L	H	I	G	L	E	D	V	D	D	L	I	A	D	L	D	A	G
Query Conservation
Alig confidence					.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				.	.													.
Template Conservation					.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				.	.													.
Template Sequence		S	F	S	.	.	.	.	G	L	T	K	E	Q	V	L	R	L	R	E	E	F	G	V	Y	A	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	S	G	.	.	R	V	N	V	A	G	M	T	P	D	N	M	.	A	P	L	C	E	A
Template Known Secondary structure					.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T		.	.				G	G	G			T	T	T		.
Template Predicted Secondary structure					.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				.	.													.
Template SS confidence
		349	350	.					.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370																															.	.	.			.	.	.	.	.	.	380	.	.	.	.	.		.	.	.	.	390	.
		391	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	A	R	I	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	V	A	V	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		392	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions