Job Description P06721 Confidence 99.95% Date Wed Jan 25 15:20:11 GMT 2012 Rank 93 Aligned Residues 317 % Identity 15% Template d2c0ra1 SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 1.2

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		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.							.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.					80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure																																			.	.	.	.	.	.																	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.																	.	.	.	.
Query Sequence		A	S	S	L	V	F	D	S	V	E	A	K	K	H	A	T	R	N	R	A	N	G	E	L	F	Y	G	R	R	G	T	L	T	.	.	.	.	.	.	H	F	S	L	Q	Q	A	M	C	E	L	E	G	G	A	G	.	.	.	.	C	V	L	F	P	C	G	A	A	A	V	A	N	S	I	L	A	F	I	E	Q
Query Conservation																																			.	.	.	.	.	.																	.	.	.	.
Alig confidence																																			.	.	.	.	.	.																	.	.	.	.
Template Conservation
Template Sequence		P	A	A	L	P	L	E	V	L	E	R	A	Q	A	E	F	V	D	Y	Q	H	T	G	M	S	I	M	E	M	S	H	R	G	A	V	Y	E	A	V	H	N	E	A	Q	A	R	L	L	A	L	L	G	N	P	T	G	Y	K	V	L	F	I	Q	G	G	A	S	T	Q	F	A	M	I	P	M	N	F	L	K	E
Template Known Secondary structure		S														T	S	S	S	S	T	T	S	S	S		G	G	G	S		T	T	S																		T	T			S	S							S	S																T
Template Predicted Secondary structure
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.						.	.	.	.	140	.	.	.		.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure																																					.	.	.	.	.									.
Query SS confidence																																					.	.	.	.	.									.
Query Sequence		G	D	H	V	L	M	T	N	T	A	Y	E	P	S	Q	D	F	C	S	K	I	L	S	K	L	G	V	T	T	S	W	F	D	P	L	.	.	.	.	.	I	G	A	D	I	V	K	H	.	L	Q	P	N	T	K	I	V	F	L	E	S	P	G	S	I	T	M	E	V	H	D	V	P	A	I	V	A	A	V	R
Query Conservation																																					.	.	.	.	.									.
Alig confidence																	.	.																			.	.	.	.	.									.																							.	.	.	.	.
Template Conservation																	.	.																																																							.	.	.	.	.
Template Sequence		G	Q	T	A	N	Y	V	M	T	G	S	W	A	S	K	.	.	A	L	K	E	A	K	L	I	G	D	T	H	V	A	A	S	S	E	A	S	N	Y	M	T	L	P	K	L	Q	E	I	Q	L	Q	D	N	A	A	Y	L	H	L	T	S	N	E	T	I	E	G	A	Q	F	K	.	.	.	.	.	A	F	P	D
Template Known Secondary structure		T									S						.	.									S									G	G	G	T	T		S				G	G	G					T	T								S			T	T	T	T				S	.	.	.	.	.	S
Template Predicted Secondary structure																	.	.																																																							.	.	.	.	.
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.			.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160						.	.	.	.
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.													.	.	.	.	240	.	.
Predicted Secondary structure																																																															.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																															.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	V	V	P	D	A	I	I	M	I	D	N	T	W	A	A	G	V	L	F	K	A	L	D	F	G	I	D	V	S	I	Q	A	A	T	K	Y	L	V	G	H	S	D	A	M	I	G	T	A	V	C	N	A	R	C	W	E	Q	L	R	E	.	.	.	.	.	.	.	.	.	.	.	.	N	A	Y	L	M	G	Q
Query Conservation																																																															.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.																					.																		.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation				.	.																					.																		.	.	.
Template Sequence		T	G	.	.	S	V	P	L	I	G	D	M	S	S	D	I	L	S	R	P	F	D	L	N	.	Q	F	G	L	V	Y	A	G	A	Q	K	N	L	G	P	S	G	.	.	.	V	T	V	V	I	V	R	E	D	L	V	A	E	S	P	K	H	L	P	T	M	L	R	Y	D	T	Y	V	K	N	N	S	L	Y	N
Template Known Secondary structure			T	.	.	T	S							T	T	T	T	T	S	S				G	G	.	G		S						T	T	T	T	T			S	S	.	.	.								G	G	G	S	S	S			T	T	S		G	G	G								T	T	T		S	S
Template Predicted Secondary structure				.	.																					.																		.	.	.
Template SS confidence
		165	.			.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.		.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.				.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.		.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure																																																																.
Query SS confidence																																																																.
Query Sequence		M	V	D	A	D	T	A	Y	I	T	S	R	G	L	R	T	L	G	V	R	L	R	Q	H	H	E	S	S	L	K	V	A	E	W	L	A	E	H	P	Q	V	A	R	V	N	H	P	A	L	P	G	S	K	G	H	E	F	W	K	R	D	F	.	T	G	S	S	G	L	F	S	F	V	L	K	K	K	L	N	N
Query Conservation																																																																.
Alig confidence																						.	.	.	.	.	.	.	.																																			.													.	.	.
Template Conservation																						.	.	.	.	.	.	.	.																																																.	.	.
Template Sequence		T	P	P	S	F	G	I	Y	M	V	N	E	V	L	K	W	I	E	E	R	.	.	.	.	.	.	.	.	G	G	L	E	G	V	Q	Q	A	N	R	K	K	A	S	L	I	Y	D	A	I	D	Q	S	G	G	F	Y	R	G	C	V	D	V	D	S	R	S	D	M	N	I	T	F	R	L	A	.	.	.	S	E
Template Known Secondary structure																					T	.	.	.	.	.	.	.	.	T																						T	S	T	T	S	S			S	S		G	G	G	B		S	S							S	.	.	.
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.																																																.	.	.
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.									.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.				.	.
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	E	L	A	N	Y	L	D	N	F	S	L	F	S	M	A	Y	S	W	G	G	Y	E	S	L	I	L	A	N	Q	P	E	H	I	A	A	I	R	P	Q	G	E	I	D	F	S	G	T	L	I	R	L	H	I	G	L	E	D	V	D	D	L	I	A	D	L	D	A	G	F	A	R	I
Query Conservation
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	L	E	K	E	F	V	K	A	S	E	Q	E	G	F	V	G	L	K	G	H	R	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	G	G	L	R	A	S	I	Y	N	A	V	P	Y	E	S	C	E	A	L	V	Q	F	M	E	H	F
Template Known Secondary structure														T	T			S		B			T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T		S							T	T	S
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330																								.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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