Job Description P06721 Confidence 99.90% Date Wed Jan 25 15:20:11 GMT 2012 Rank 192 Aligned Residues 321 % Identity 15% Template d1yaaa_ SCOP info PLP-dependent transferase-like PLP-dependent transferases AAT-like Resolution 2.05

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		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.											.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure																																				.																	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																				.																	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	V	I	Q	R	A	S	S	L	V	F	D	S	V	E	A	K	K	H	A	T	R	N	R	A	N	G	E	L	F	Y	G	R	R	.	G	T	L	T	H	F	S	L	Q	Q	A	M	C	E	L	E	.	.	.	.	.	.	.	.	.	.	G	G	A	G	C	V	L	F	P	C	G	A	A	A	V	A	N	S	I
Query Conservation																																				.																	.	.	.	.	.	.	.	.	.	.
Alig confidence																																				.				.	.	.											.	.	.	.	.	.	.	.	.	.
Template Conservation																																								.	.	.
Template Sequence		Y	R	D	D	N	G	K	P	W	V	L	P	S	V	K	A	A	E	K	L	I	H	N	D	S	S	Y	N	H	E	Y	L	G	I	T	G	L	P	.	.	.	S	L	T	S	N	A	A	K	I	I	F	G	T	Q	S	D	A	L	Q	E	D	R	V	I	S	V	Q	S	L	S	G	T	G	A	L	H	I	S	A
Template Known Secondary structure			B		T	T	S		B															T		T	T								T	T				.	.	.													T	T						T	T
Template Predicted Secondary structure																																								.	.	.
Template SS confidence
		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.				.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
		95	.	.			.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.								.	.	.	.	140	.	.	.	.	.	.	.	.	.				150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure					.	.																																							.	.	.	.	.	.	.															.	.	.
Query SS confidence					.	.																																							.	.	.	.	.	.	.															.	.	.
Query Sequence		L	A	F	.	.	I	E	Q	G	D	H	V	L	M	T	N	T	A	Y	E	P	S	Q	D	F	C	S	K	I	L	S	K	L	G	V	T	T	S	W	F	D	P	L	.	.	.	.	.	.	.	I	G	A	D	I	V	K	H	L	Q	P	N	T	K	.	.	.	I	V	F	L	E	S	P	G	S	I	T	M	E
Query Conservation					.	.																																							.	.	.	.	.	.	.															.	.	.
Alig confidence					.	.																						.	.	.	.														.	.	.	.	.	.	.															.	.	.
Template Conservation																												.	.	.	.
Template Sequence		K	F	F	S	K	F	F	P	D	K	L	V	Y	L	S	K	P	T	W	A	N	H	M	A	I	F	.	.	.	.	E	N	Q	G	L	K	T	A	T	Y	P	Y	W	A	N	E	T	K	S	L	D	L	N	G	F	L	N	A	I	Q	K	A	P	E	G	S	I	F	V	L	H	S	C	A	H	N	P	T	G	L
Template Known Secondary structure									T	T								S			T	T						.	.	.	.		T	T	T											T	T	T	T														S		T	T								S	S		T	T	T
Template Predicted Secondary structure																												.	.	.	.
Template SS confidence
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.					.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
		163	.	.	.	.	.	.	170	.	.	.	.		.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.															.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure														.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.
Query SS confidence														.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.
Query Sequence		V	H	D	V	P	A	I	V	A	A	V	R	.	S	V	V	P	D	A	I	I	M	I	D	N	T	W	A	A	G	V	L	F	K	A	L	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	G	I	D	V	S	I	Q	A	A	T	K	Y	L	V	G	H	S	D	A	M	I	G	T	A	V	C	.	.
Query Conservation														.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.
Alig confidence														.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.															.													.	.
Template Conservation																																																																			.
Template Sequence		D	P	T	S	E	Q	W	V	Q	I	V	D	A	I	A	S	K	N	H	I	A	L	F	D	T	A	Y	Q	G	F	A	T	G	D	L	D	K	D	A	Y	A	V	R	L	G	V	E	K	L	S	T	V	S	P	V	F	V	C	Q	S	F	A	K	N	A	.	G	M	Y	G	E	R	V	G	C	F	H	L	A	L
Template Known Secondary structure																		T	T								S		T	T	T	S	S	S						T										T	T	T	T										T	T	T	S	.			G	G	G
Template Predicted Secondary structure																																																																			.
Template SS confidence
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.		.	.	.	.	.	.	270	.	.	.	.	.	.	.
											226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	N	A	R	C	W	E	Q	L	R	E	N	A	Y	L	M	G	Q	M	V	D	A	D	T	A	Y	I	T	S	R	G	L	R	T	L	G	V	R	L	R	Q	H	H	E	S	S	L	K	V	A	E	W	L	A	E	H	P	Q	V	A	R	V	N	H	P	A	L	P	G	S	K	G
Query Conservation		.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.																																										.	.	.	.
Template Conservation																																																				.	.	.	.
Template Sequence		T	K	Q	A	Q	N	K	T	I	K	P	A	V	T	S	Q	L	A	K	I	I	R	S	E	V	S	N	P	P	A	Y	G	A	K	I	V	A	K	L	L	E	T	P	E	L	T	E	Q	W	H	.	.	.	.	K	D	M	V	T	M	S	S	R	I	T	K	M	R	H	A	L	R	D	H	L	V	K	L	G	T
Template Known Secondary structure			S		T	T																		T	T	T	S	S															S									.	.	.	.																									T
Template Predicted Secondary structure																																																				.	.	.	.
Template SS confidence
		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320					.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.
		297	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	E	F	W	K	R	D	F	T	G	S	S	G	L	F	S	F	V	L	K	K	K	L	N	N	E	E	L	A	N	Y	L	D	N	F	S	L	F	S	M	A	Y	S	W	G	G	Y	E	S	L	I	L	A	N	Q	P	E	H	I	A	A	I	R	P	Q	G	E	I	D	F	S	G	T	L	I	R	L	H	I	G
Query Conservation
Alig confidence																					.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				.	.
Template Conservation																					.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				.	.
Template Sequence		P	G	N	W	D	H	I	V	N	Q	C	G	M	F	S	F	T	G	L	.	.	.	.	T	P	Q	M	V	K	R	L	E	E	T	H	A	V	Y	L	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	S	G	.	.	R	A	S	I	A
Template Known Secondary structure		S	S			T							S	S							.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	S	.	.				G	G
Template Predicted Secondary structure																					.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				.	.
Template SS confidence
		347	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.					.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.																															.	.	.			.	.	.	.	390
					377	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	L	E	D	V	D	D	L	I	A	D	L	D	A	G	F	A	R	I
Query Conservation		.	.	.
Alig confidence		.	.	.
Template Conservation
Template Sequence		G	L	N	Q	G	N	V	E	Y	V	A	K	A	I	D	E	V	V	R	F	Y
Template Known Secondary structure		G			T	T	T
Template Predicted Secondary structure
Template SS confidence
		391	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions