Job Description P06721 Confidence 99.87% Date Wed Jan 25 15:20:11 GMT 2012 Rank 208 Aligned Residues 288 % Identity 15% Template d1rv3a_ SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 2.40

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		65	.	.	.	.	70	.	.	.	.	.	.	.	.		.	80	.	.	.	.					.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.							.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
Predicted Secondary structure																.							.	.	.	.																																			.	.	.	.	.	.
Query SS confidence																.							.	.	.	.																																			.	.	.	.	.	.
Query Sequence		F	S	L	Q	Q	A	M	C	E	L	E	G	G	A	.	G	C	V	L	F	P	.	.	.	.	C	G	A	A	A	V	A	N	S	I	L	A	F	I	E	Q	G	D	H	V	L	M	T	N	T	A	Y	E	P	S	Q	D	F	C	.	.	.	.	.	.	S	K	I	L	S	K	L	G	V	T	T	S	W	F	D
Query Conservation																.							.	.	.	.																																			.	.	.	.	.	.
Alig confidence																.							.	.	.	.																																			.	.	.	.	.	.
Template Conservation
Template Sequence		T	L	C	Q	K	R	A	L	Q	A	Y	G	L	D	P	Q	C	W	G	V	N	V	Q	P	Y	S	G	S	P	A	N	F	A	V	Y	T	A	L	V	E	P	H	G	R	I	M	G	L	D	L	P	D	G	G	H	L	T	H	G	F	M	T	D	K	K	K	I	S	A	T	S	I	F	F	E	S	M	A	Y	K
Template Known Secondary structure												T	T			T	T	T								S	S													T		T	T								G	G	G	T			G	G	G			B		S	S		B		S						S
Template Predicted Secondary structure
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
		134	.							.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.						.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure				.	.	.	.	.	.																																																									.	.	.	.	.
Query SS confidence				.	.	.	.	.	.																																																									.	.	.	.	.
Query Sequence		P	L	.	.	.	.	.	.	I	G	A	D	I	V	K	H	L	Q	P	N	T	K	I	V	F	L	E	S	P	G	S	I	T	M	E	V	H	D	V	P	A	I	V	A	A	V	R	S	V	V	P	D	A	I	I	M	I	D	N	T	W	A	A	G	.	.	.	.	.	V	L	F	K	A	L	D	F	G	I	D
Query Conservation				.	.	.	.	.	.																																																									.	.	.	.	.
Alig confidence				.	.	.	.	.	.																								.																		.	.														.	.	.	.	.								.
Template Conservation																																	.																		.	.																										.
Template Sequence		V	N	P	D	T	G	Y	I	D	Y	D	R	L	E	E	N	A	R	L	F	H	P	K	L	I	I	A	G	T	S	C	.	Y	S	R	N	L	D	Y	G	R	L	R	K	I	A	D	E	N	.	.	G	A	Y	L	M	A	D	M	A	H	I	S	G	L	V	V	A	G	V	V	P	S	P	F	E	.	H	C	H
Template Known Secondary structure		B		T	T	T		S	B															S							S	S	.			S														T	.	.	T								T	T	T							T	S	S			G	G	G	.	T		S
Template Predicted Secondary structure																																	.																		.	.																										.
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.		.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.			.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.		.	.	.
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.									.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.							250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
Predicted Secondary structure																												.	.	.	.	.	.	.	.																						.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.	.	.	.																						.	.	.	.	.	.
Query Sequence		V	S	I	Q	A	A	T	K	Y	L	V	G	H	S	D	A	M	I	G	T	A	V	C	N	A	R	.	.	.	.	.	.	.	.	C	W	E	Q	L	R	E	N	A	Y	L	M	G	Q	M	V	D	A	D	T	A	.	.	.	.	.	.	Y	I	T	S	R	G	L	R	T	L	G	V	R	L	R	Q	H	H	E
Query Conservation																												.	.	.	.	.	.	.	.																						.	.	.	.	.	.
Alig confidence																.	.	.										.	.	.	.	.	.	.	.																						.	.	.	.	.	.
Template Conservation																.	.	.
Template Sequence		V	V	T	T	T	T	H	K	T	L	R	G	C	R	.	.	.	A	G	M	I	F	Y	R	R	G	V	R	S	E	I	L	Y	N	L	E	S	L	I	N	S	A	V	F	P	G	L	Q	G	G	P	H	N	H	A	I	A	G	V	A	V	A	L	K	Q	A	M	T	P	E	F	K	E	Y	Q	R	Q	V	V	A
Template Known Secondary structure							S	S	G	G	G				S	.	.	.									S	B					B												T	T	T	T			S																	T	S
Template Predicted Secondary structure																.	.	.
Template SS confidence
		250	.	.	.	.	.	.	.	.	.	260	.	.	.				.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.
Predicted Secondary structure																																																					.
Query SS confidence																																																					.
Query Sequence		S	S	L	K	V	A	E	W	L	A	E	H	P	Q	V	A	R	V	N	H	P	A	L	P	G	S	K	G	H	E	F	W	K	R	D	F	T	G	S	S	G	L	F	S	F	V	L	K	K	K	L	.	N	N	E	E	L	A	N	Y	L	D	N	F	S	L	F	S	M	A	Y	S	W	G	G	Y	E	S	L	I
Query Conservation																																																					.
Alig confidence															.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.
Template Conservation															.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	C	R	A	L	S	A	A	L	V	E	L	G	.	.	Y	K	I	V	T	G	G	S	D	N	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	I	L	V	D	L	R	S	K	G	T	D	G	G	R	A	E	K	V	L	E	A	C	S	I	A	C	N	K	N	T	C	P	G	D	K	S	A	L
Template Known Secondary structure													T	T	.	.				G	G	G	S		S	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						G	G	G	G	T													T	T									S	S		S		T	T
Template Predicted Secondary structure															.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		334	.	.	.	.	.	340	.	.	.	.	.	.			.	.	.	350	.	.	.	.	.	.	.																.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
		348	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.					.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.
Predicted Secondary structure																															.	.	.	.
Query SS confidence																															.	.	.	.
Query Sequence		L	A	N	Q	P	E	H	I	A	A	I	R	P	Q	G	E	I	D	F	S	G	T	L	I	R	L	H	I	G	.	.	.	.	L	E	D	V	D	D	L	I	A	D	L	D	A	G	F	A	R	I	V
Query Conservation																															.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.
Template Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	P	S	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	R	L	G	T	P	A	L	T	S	R	G	L	L	E	K	D	F	Q	K	V	A	H	F	I	H	R	G	I
Template Known Secondary structure		S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											T	T
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		397	.	.	400																				.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions