Job Description P06721 Confidence 99.90% Date Wed Jan 25 15:20:11 GMT 2012 Rank 191 Aligned Residues 333 % Identity 12% Template d1pmma_ SCOP info PLP-dependent transferase-like PLP-dependent transferases Pyridoxal-dependent decarboxylase Resolution 2.00

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		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70					.	.	.	.	.	.	.	.	.								80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure																																										.	.	.	.										.	.	.	.	.	.	.																			.	.
Query SS confidence																																										.	.	.	.										.	.	.	.	.	.	.																			.	.
Query Sequence		A	S	S	L	V	F	D	S	V	E	A	K	K	H	A	T	R	N	R	A	N	G	E	L	F	Y	G	R	R	G	T	L	T	H	F	S	L	Q	Q	A	.	.	.	.	M	C	E	L	E	G	G	A	G	.	.	.	.	.	.	.	C	V	L	F	P	C	G	A	A	A	V	A	N	S	I	L	A	F	.	.
Query Conservation																																										.	.	.	.										.	.	.	.	.	.	.																			.	.
Alig confidence																					.	.	.	.																		.	.	.	.										.	.	.	.	.	.	.																			.	.
Template Conservation																					.	.	.	.
Template Sequence		C	Q	T	W	D	D	E	N	V	H	K	L	M	D	L	S	I	N	K	.	.	.	.	N	W	I	D	K	E	E	Y	P	Q	S	A	A	I	D	L	R	C	V	N	M	V	A	D	L	W	H	A	P	A	P	K	N	G	Q	A	V	G	T	N	T	I	G	S	S	E	A	C	M	L	G	G	M	A	M	K	W
Template Known Secondary structure		S															T	T	T		.	.	.	.	B	T	T		T	T	T	S																		T	T					T	T	S			S					S	S
Template Predicted Secondary structure																					.	.	.	.
Template SS confidence
		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.					.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
												98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.							.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																																							.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.																																							.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	I	E	Q	G	D	H	V	L	M	T	N	T	A	Y	E	P	S	Q	D	F	C	S	K	I	L	S	K	L	G	V	T	T	S	W	F	D	P	L	.	.	.	.	.	.	I	G	A	D	I	V	K	H	L	Q	P	N	T	K	I	V	F	L	E	S	P	G	S	I	T	M
Query Conservation		.	.	.	.	.	.	.	.	.	.																																							.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.																	.	.	.	.																			.	.	.	.	.	.
Template Conservation																												.	.	.	.
Template Sequence		R	W	R	K	R	M	E	A	A	G	K	P	T	D	K	P	N	L	V	C	G	P	V	Q	I	C	.	.	.	.	W	H	K	F	A	R	Y	W	D	V	E	L	R	E	I	P	M	R	P	G	Q	L	F	M	D	P	K	R	M	I	E	A	C	D	E	N	T	I	G	V	V	P	T	F	G	V	T	Y	T	G
Template Known Secondary structure											T				S							S	S					.	.	.	.								T	T									B	T	T	B		S												T	T							B	B	S		T	T	T
Template Predicted Secondary structure																												.	.	.	.
Template SS confidence
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.					.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.							180	.	.	.	.	.	.	.	.	.	190	.	.	.									.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.															.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.															.	.	.	.	.	.	.	.
Query Sequence		E	V	H	D	V	P	A	I	V	A	A	V	R	S	V	V	P	D	.	.	.	.	.	.	A	I	I	M	I	D	N	T	W	A	A	G	V	L	.	.	.	.	.	.	.	.	F	K	A	L	D	F	G	I	D	V	S	I	Q	A	A	T	K	Y	L	V	G	H	S	D	A	M	I	G	T	A	V	C	N	A
Query Conservation																				.	.	.	.	.	.															.	.	.	.	.	.	.	.
Alig confidence																	.	.		.	.	.	.	.	.															.	.	.	.	.	.	.	.
Template Conservation																	.	.
Template Sequence		N	Y	E	F	P	Q	P	L	H	D	A	L	D	K	F	.	.	Q	A	D	T	G	I	D	I	D	M	H	I	D	A	A	S	G	G	F	L	A	P	F	V	A	P	D	I	V	W	D	F	R	L	P	R	V	K	S	I	S	A	S	G	H	K	F	G	L	A	P	L	G	C	G	W	V	I	W	R	D	E	E
Template Known Secondary structure		B	B														.	.															T	T	G	G	G	T						T	T				S	T	T	S	T	T								T	T	T	T	T				S	S							S	S	G	G
Template Predicted Secondary structure																	.	.
Template SS confidence
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230			.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	C	W	E	Q	L	R	E	N	A	Y	L	M	G	Q	M	V	D	A	D	T	A	Y	I	T	S	R	G	L	R	T	L	G	V	R	L	R	Q	H	H	E	S	S	L	K	V	A	E	W	L	A	E	H	P	Q	V	A	R	V	N	H	P	A	L	P	G	S	K	G	H	E	F	W	K	R	D	F	T	G	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	L	P	Q	E	L	V	F	N	V	D	Y	L	G	G	Q	I	G	T	F	A	I	N	F	S	R	P	A	G	Q	V	I	A	Q	Y	Y	E	F	L	R	L	G	R	E	G	Y	T	K	V	Q	N	A	S	Y	Q	V	A	A	Y	L	A	D	E	I	A	K	L	G	P	Y	E	F	I	C	T	G	R	P	D	E
Template Known Secondary structure		G	S		G	G	G							T	T								S			S		B	S																																						T	T	S										T	T	T
Template Predicted Secondary structure
Template SS confidence
		294	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.
		308		.	310	.	.	.	.	.					.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.					.
Predicted Secondary structure			.								.	.	.	.																																																															.	.	.	.
Query SS confidence			.								.	.	.	.																																																															.	.	.	.
Query Sequence		S	.	G	L	F	S	F	V	L	.	.	.	.	K	K	K	L	N	N	E	E	L	A	N	Y	L	D	N	F	S	L	F	S	M	A	Y	S	W	G	G	Y	E	S	L	I	L	A	N	Q	P	E	H	I	A	A	I	R	P	Q	G	E	I	D	F	S	G	T	L	I	R	L	H	I	G	L	.	.	.	.	E
Query Conservation			.								.	.	.	.																																																															.	.	.	.
Alig confidence			.								.	.	.	.																										.	.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.
Template Conservation																																								.	.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	I	P	A	V	C	F	K	L	K	D	G	E	D	P	G	Y	T	L	Y	D	L	S	E	R	L	R	L	R	G	W	Q	V	P	A	F	T	L	.	.	.	.	.	.	.	.	.	G	G	E	A	T	.	.	.	.	.	.	.	.	.	.	.	.	D	I	V	V	M	R	I	M	C	R	R	G	F	E	M	D
Template Known Secondary structure		B	S	S								T	T				S	S											T	T	T		B							.	.	.	.	.	.	.	.	.		T	T		T	.	.	.	.	.	.	.	.	.	.	.	.	T										T	T
Template Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		374	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.										.	.	.	.	.													.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.
		379	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	V	D	D	L	I	A	D	L	D	A	G	F	A	R	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	A	E	L	L	L	E	D	Y	K	A	S	L	K	Y	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		433	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions