Job Description P06721 Confidence 100.00% Date Wed Jan 25 15:20:11 GMT 2012 Rank 11 Aligned Residues 383 % Identity 27% Template d1n8pa_ SCOP info PLP-dependent transferase-like PLP-dependent transferases Cystathionine synthase-like Resolution 2.60

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		1	.	.		.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure					.
Query SS confidence					.
Query Sequence		M	A	D	.	K	K	L	D	T	Q	L	V	N	A	G	R	S	K	K	Y	T	L	G	A	V	N	S	V	I	Q	R	A	S	S	L	V	F	D	S	V	E	A	K	K	H	A	T	R	N	R	A	N	G	E	L	F	Y	G	R	R	G	T	L	T	H	F	S	L	Q	Q	A	M	C	E	L	E	G	G	A	G
Query Conservation					.
Alig confidence					.																	.																			.	.	.	.	.	.	.	.
Template Conservation																						.																			.	.	.	.	.	.	.	.
Template Sequence		L	Q	E	S	D	K	F	A	T	K	A	I	H	A	G	E	H	V	D	V	.	H	G	S	V	I	E	P	I	S	L	S	T	T	F	K	Q	S	S	.	.	.	.	.	.	.	.	P	A	N	P	I	G	T	Y	E	Y	S	R	S	Q	N	P	N	R	E	N	L	E	R	A	V	A	A	L	E	N	A	Q	Y
Template Known Secondary structure				S	S										T	T					S	.	S			S	S							S	B			B	S	S	.	.	.	.	.	.	.	.	S	S	S	B	S	S	S			B	T	T	T																T	T		S
Template Predicted Secondary structure																						.																			.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.		.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.									40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	V	L	F	P	C	G	A	A	A	V	A	N	S	I	L	A	F	I	E	Q	G	D	H	V	L	M	T	N	T	A	Y	E	P	S	Q	D	F	C	S	K	I	L	S	K	L	G	V	T	T	S	W	F	D	P	L	I	G	A	D	I	V	K	H	L	Q	P	N	T	K	I	V	F	L	E	S	P	G	S	I
Query Conservation
Alig confidence																	.																																							.
Template Conservation																	.																																							.
Template Sequence		G	L	A	F	S	S	G	S	A	T	T	A	T	I	L	.	Q	S	L	P	Q	G	S	H	A	V	S	I	G	D	V	Y	G	G	T	H	R	Y	F	T	K	V	A	N	A	H	G	V	E	T	S	F	T	N	.	D	L	L	N	D	L	P	Q	L	I	K	E	N	T	K	L	V	W	I	E	T	P	T	N	P
Template Known Secondary structure						S											.		T	S		S	S							S	S												T	S	T	T	T		S						S	.	S									S		S	S								S	S		T	T
Template Predicted Secondary structure																	.																																							.
Template SS confidence
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.		.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.		.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.			.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.		.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure																				.	.																																																.
Query SS confidence																				.	.																																																.
Query Sequence		T	M	E	V	H	D	V	P	A	I	V	A	A	V	R	S	V	V	.	.	P	D	A	I	I	M	I	D	N	T	W	A	A	G	V	L	F	K	A	L	D	F	G	I	D	V	S	I	Q	A	A	T	K	Y	L	V	G	H	S	D	A	M	I	G	T	A	V	.	C	N	A	R	C	W	E	Q	L	R	E	N
Query Conservation																				.	.																																																.
Alig confidence																				.	.																																																.
Template Conservation
Template Sequence		T	L	K	V	T	D	I	Q	K	V	A	D	L	I	K	K	H	A	A	G	Q	D	V	I	L	V	V	D	N	T	F	L	S	P	Y	I	S	N	P	L	N	F	G	A	D	I	V	V	H	S	A	T	K	Y	I	N	G	H	S	D	V	V	L	G	V	L	A	T	N	N	K	P	L	Y	E	R	L	Q	F	L
Template Known Secondary structure		T																	T	T	T	T	T								T	T	T							G	G	G	G	T		S						T	T	T	T	T	T		S	S										S
Template Predicted Secondary structure
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
Predicted Secondary structure																																													.
Query SS confidence																																													.
Query Sequence		A	Y	L	M	G	Q	M	V	D	A	D	T	A	Y	I	T	S	R	G	L	R	T	L	G	V	R	L	R	Q	H	H	E	S	S	L	K	V	A	E	W	L	A	E	.	H	P	Q	V	A	R	V	N	H	P	A	L	P	G	S	K	G	H	E	F	W	K	R	D	F	T	G	S	S	G	L	F	S	F	V	L
Query Conservation																																													.
Alig confidence																																													.
Template Conservation
Template Sequence		Q	N	A	I	G	A	I	P	S	P	F	D	A	W	L	T	H	R	G	L	K	T	L	H	L	R	V	R	Q	A	A	L	S	A	N	K	I	A	E	F	L	A	A	D	K	E	N	V	V	A	V	N	Y	P	G	L	K	T	H	P	N	Y	D	V	V	L	K	Q	H	R	D	A	L	G	G	G	M	I	S	F
Template Known Secondary structure																						T	T																				T	S		T	T	T							T	T	S	T	T	S	T	T								S	G	G	G				S
Template Predicted Secondary structure
Template SS confidence
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.			.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.
Predicted Secondary structure																																																.	.
Query SS confidence																																																.	.
Query Sequence		K	K	K	L	N	N	E	E	L	A	N	Y	L	D	N	F	S	L	F	S	M	A	Y	S	W	G	G	Y	E	S	L	I	L	A	N	Q	P	E	H	I	A	A	I	R	P	Q	.	.	G	E	I	D	F	S	G	T	L	I	R	L	H	I	G	L	E	D	V	D	D	L	I	A	D	L	D	A	G	F	A	R
Query Conservation																																																.	.
Alig confidence																																																.	.
Template Conservation
Template Sequence		R	I	K	G	G	A	E	A	A	S	K	F	A	S	S	T	R	L	F	T	L	A	E	S	L	G	G	I	E	S	L	L	E	V	P	A	V	M	T	H	G	G	I	P	K	E	A	R	E	A	S	G	V	F	D	D	L	V	R	I	S	V	G	I	E	D	T	D	D	L	L	E	D	I	K	Q	A	L	K	Q
Template Known Secondary structure				S	S													S	S	S				S					S	S						T	T	T	T	T	S		S	S		T	T	T	T	T	T	T	S			T	T								S	S
Template Predicted Secondary structure
Template SS confidence
		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390
		394
Predicted Secondary structure
Query SS confidence
Query Sequence		I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		391

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions