Job Description P06721 Confidence 99.80% Date Wed Jan 25 15:20:11 GMT 2012 Rank 224 Aligned Residues 313 % Identity 15% Template d1ejia_ SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 2.90

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		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.			60	.	.	.	.	.	.	.	.					.	70	.	.	.	.	.	.	.	.	.	80	.	.	.						.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.										.	.	.	.																.	.	.	.	.
Query SS confidence																						.	.										.	.	.	.																.	.	.	.	.
Query Sequence		E	A	K	K	H	A	T	R	N	R	A	N	G	E	L	F	Y	G	R	R	.	.	G	T	L	T	H	F	S	L	Q	.	.	.	.	Q	A	M	C	E	L	E	G	G	A	G	C	V	L	F	.	.	.	.	.	P	C	G	A	A	A	V	A	N	S	I	L	A	F	I	E	Q	G	D	H	V	L	M	T	N
Query Conservation																						.	.										.	.	.	.																.	.	.	.	.
Alig confidence																						.	.										.	.	.	.																.	.	.	.	.
Template Conservation
Template Sequence		E	A	L	G	S	S	L	N	N	K	Y	S	E	G	Y	P	G	Q	R	Y	Y	G	G	T	E	F	I	D	E	L	E	X	L	C	Q	K	R	A	L	Q	A	Y	H	L	D	P	Q	C	W	G	V	N	V	Q	P	Y	S	G	S	P	A	N	F	A	V	Y	T	A	L	V	E	P	H	G	R	I	X	G	L	D
Template Known Secondary structure					T	S	G	G	G	G					S		S	S	S		S	S	S																				T	T			T	T	T								S	S													T		T	T
Template Predicted Secondary structure
Template SS confidence
		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
		109	110	.	.	.	.	.	.									.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.					.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.	.	.																				.	.	.	.
Query SS confidence										.	.	.	.	.	.	.	.																				.	.	.	.
Query Sequence		T	A	Y	E	P	S	Q	D	.	.	.	.	.	.	.	.	F	C	S	K	I	L	S	K	L	G	V	T	T	S	W	F	D	P	L	.	.	.	.	I	G	A	D	I	V	K	H	L	Q	P	N	T	K	I	V	F	L	E	S	P	G	S	I	T	M	E	V	H	D	V	P	A	I	V	A	A	V	R	S	V
Query Conservation										.	.	.	.	.	.	.	.																				.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.																				.	.	.	.																						.
Template Conservation																																																														.
Template Sequence		L	P	D	G	G	H	L	T	H	G	F	X	T	D	K	K	K	I	S	A	T	S	I	F	F	E	S	X	P	Y	K	V	Y	P	E	T	G	Y	I	N	Y	D	Q	L	E	E	N	A	S	L	F	H	P	K	L	I	I	A	G	T	.	S	C	Y	S	R	N	L	D	Y	A	R	L	R	K	I	A	D	D	N
Template Known Secondary structure		G	G	G	T			G	G	G			B		S	S		B		S						S							B		T	T	T		S	B															S							.	S	S			S														T
Template Predicted Secondary structure																																																														.
Template SS confidence
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.		.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
		177	.	.	180	.	.	.	.	.	.	.	.						.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.																.	.	230	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	P	D	A	I	I	M	I	D	N	T	W	.	.	.	.	.	A	A	G	V	L	F	K	A	L	D	F	G	I	D	V	S	I	Q	A	A	T	K	Y	L	V	G	H	S	D	A	M	I	G	T	A	V	C	N	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	C	W	E	Q	L	R	E	N
Query Conservation														.	.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.											.	.	.	.	.											.																		.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.																										.																		.	.	.
Template Sequence		.	.	G	A	Y	L	X	A	D	X	A	H	I	S	G	L	V	A	A	G	V	V	P	S	P	F	E	.	H	C	H	V	V	T	T	T	T	H	K	T	L	R	G	C	R	.	.	.	A	G	X	I	F	Y	R	K	G	V	R	S	V	D	P	K	T	G	K	E	T	Y	Y	E	L	E	S	L	I	N	S	A
Template Known Secondary structure		.	.	T								G	G	G						T	T	S	S			G	G	G	.	T		S						S	S	G	G	G				S	.	.	.															S	T	T
Template Predicted Secondary structure		.	.																										.																		.	.	.
Template SS confidence
				222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.		.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.				.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
		237	.	.	240	.	.							.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure								.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.
Query Sequence		A	Y	L	M	G	Q	.	.	.	.	.	.	M	V	D	A	D	T	A	Y	I	T	S	R	G	L	R	T	L	G	V	R	L	R	Q	H	H	E	S	S	L	K	V	A	E	W	L	A	E	H	P	Q	V	A	R	V	N	H	P	A	L	P	G	S	K	G	H	E	F	W	K	R	D	F	T	G	S	S	G	L
Query Conservation								.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.																																									.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																						.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	F	P	G	L	Q	G	G	P	H	N	H	A	I	A	G	V	A	V	A	L	K	Q	A	X	T	T	E	F	K	I	Y	Q	L	Q	V	L	A	N	C	R	A	L	S	D	A	L	T	E	L	G	Y	.	.	K	I	V	T	G	G	S	D	N	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L
Template Known Secondary structure			T	T	T	T			S																	T	S																								T	T		.	.		B	T	T	S	S		S	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																						.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.			.	.	350	.	.	.	.	.	.	.																.
		311	.	.	.	.	.	.	.	.		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.					.	.	.	380	.	.	.	.	.
Predicted Secondary structure											.																																																										.	.	.	.
Query SS confidence											.																																																										.	.	.	.
Query Sequence		F	S	F	V	L	K	K	K	L	.	N	N	E	E	L	A	N	Y	L	D	N	F	S	L	F	S	M	A	Y	S	W	G	G	Y	E	S	L	I	L	A	N	Q	P	E	H	I	A	A	I	R	P	Q	G	E	I	D	F	S	G	T	L	I	R	L	H	I	G	.	.	.	.	L	E	D	V	D	D	L	I	A
Query Conservation											.																																																										.	.	.	.
Alig confidence											.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.
Template Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	L	X	D	L	R	S	K	G	T	D	G	G	R	A	E	K	V	L	E	A	C	S	I	A	C	N	K	N	T	C	P	G	D	K	S	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	R	P	S	G	L	R	L	G	T	P	A	L	T	S	R	G	L	L	E	E	D	F	Q
Template Known Secondary structure						G	G	G	G	T													T	T				B					S	S	S	S		T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S		S											T	T	T
Template Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		359	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.																				.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.
		386	.	.	.	390	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	L	D	A	G	F	A	R	I	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	V	A	H	F	I	H	R	G	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		420	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions