Job Description P06721 Confidence 99.95% Date Wed Jan 25 15:20:11 GMT 2012 Rank 102 Aligned Residues 319 % Identity 12% Template c3n0lA_ PDB info PDB header:transferase Chain: A: PDB Molecule:serine hydroxymethyltransferase; PDBTitle: crystal structure of serine hydroxymethyltransferase from2 campylobacter jejuni Resolution 1.80 Å

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		27	.	.	30	.	.	.	.	.	.	.		.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.			60	.	.	.	.	.	.	.	.	.	70					.	.	.	.	.	.	.	.	.	80	.	.	.	.		.	.	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure													.																							.	.												.	.	.	.															.
Query SS confidence													.																							.	.												.	.	.	.															.
Query Sequence		V	I	Q	R	A	S	S	L	V	F	D	.	S	V	E	A	K	K	H	A	T	R	N	R	A	N	G	E	L	F	Y	G	R	R	.	.	G	T	L	T	H	F	S	L	Q	Q	A	.	.	.	.	M	C	E	L	E	G	G	A	G	C	V	L	F	P	.	C	G	A	A	A	V	A	N	S	I	L	A	F	I
Query Conservation													.																							.	.												.	.	.	.															.
Alig confidence													.																							.	.												.	.	.	.															.
Template Conservation
Template Sequence		E	X	I	A	S	E	N	F	T	L	P	E	V	X	E	V	X	G	S	I	L	T	N	K	Y	A	E	G	Y	P	G	K	R	Y	Y	G	G	C	E	F	V	D	E	I	E	T	L	A	I	E	R	C	K	K	L	F	N	C	K	F	A	N	V	Q	P	N	S	G	S	Q	A	N	Q	G	V	Y	A	A	L	I
Template Known Secondary structure					T	T													T	S	G	G	G	G							T	T			S	S	S																					T		S							S	S													S
Template Predicted Secondary structure
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	Q	G	D	H	V	L	M	T	N	T	A	Y	E	P	S	Q	D	F	C	S	K	I	L	S	K	L	G	V	T	T	S	W	F	D	P	L	I	G	A	D	I	V	K	H	L	Q	P	N	T	K	I	V	F	L	E	S	P	G	S	I	T	M	E	V	H	D	V	P	A	I	V	A	A	V	R	S	V	V	P
Query Conservation
Alig confidence																	.	.	.	.	.	.	.	.	.	.																																		.																				.	.
Template Conservation																	.	.	.	.	.	.	.	.	.	.																																		.																				.	.
Template Sequence		N	P	G	D	K	I	L	G	X	D	L	K	X	Y	E	.	.	.	.	.	.	.	.	.	.	S	C	F	Y	G	V	E	L	D	G	R	I	D	Y	E	K	V	R	E	I	A	K	K	E	K	P	K	L	I	V	C	G	A	.	S	A	Y	A	R	V	I	D	F	A	K	F	R	E	I	A	D	E	I	.	.
Template Known Secondary structure			T	T											S		.	.	.	.	.	.	.	.	.	.								T	T	S	S																S							.	S	S			S															.	.
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.																																		.																				.	.
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120											.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.		.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.					.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.																																																							.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.																																																							.	.	.	.	.	.	.
Query Sequence		D	A	I	I	M	I	D	N	T	W	A	A	G	V	L	.	.	.	.	F	K	A	L	D	F	G	I	D	V	S	I	Q	A	A	T	K	Y	L	V	G	H	S	D	A	M	I	G	T	A	V	C	N	A	R	C	W	E	Q	L	R	E	N	A	Y	L	M	G	Q	M	V	D	A	D	.	.	.	.	.	.	.
Query Conservation																	.	.	.	.																																																							.	.	.	.	.	.	.
Alig confidence																	.	.	.	.																								.	.	.																													.	.	.	.	.	.	.
Template Conservation																																												.	.	.
Template Sequence		G	A	Y	L	F	A	D	I	A	H	I	A	G	L	V	V	A	G	E	H	P	S	P	F	P	Y	A	H	V	V	S	S	T	T	H	K	T	L	R	G	P	R	.	.	.	G	G	I	I	X	T	N	D	E	E	L	A	K	K	I	N	S	A	I	F	P	G	I	Q	G	G	P	L	X	H	V	I	A	A	K
Template Known Secondary structure		T								T	T	T						T	T	S	S				T	T	T		S						S	S	T	T	T		S		S	.	.	.							S													T	T	T	T		S	S
Template Predicted Secondary structure																																												.	.	.
Template SS confidence
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230				.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	A	Y	I	T	S	R	G	L	R	T	L	G	V	R	L	R	Q	H	H	E	S	S	L	K	V	A	E	W	L	A	E	H	P	Q	V	A	R	V	N	H	P	A	L	P	G	S	K	G	H	E	F	W	K	R	D	F	T	G	S	S	G	L	F	S	F	V	L	K	K	K	L	N	N	E	E	L	A	N	Y
Query Conservation
Alig confidence																																					.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																					.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	V	G	F	K	F	N	L	S	D	E	W	K	V	Y	A	K	Q	V	R	T	N	A	Q	V	L	A	N	V	L	X	D	R	K	F	.	.	K	L	V	S	D	G	T	D	N	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	V	L	X	S	F	L	D	R	E	F	S	G	K	D	A
Template Known Secondary structure									T	S																								T	T		.	.			G	G	G	S		S	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							T	T	S	S	S
Template Predicted Secondary structure																																					.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300			.	.	.	.	.	.	.	.	.	310																		.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
		328	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.									.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.
Predicted Secondary structure																																																			.	.	.	.	.	.	.	.
Query SS confidence																																																			.	.	.	.	.	.	.	.
Query Sequence		L	D	N	F	S	L	F	S	M	A	Y	S	W	G	G	Y	E	S	L	I	L	A	N	Q	P	E	H	I	A	A	I	R	P	Q	G	E	I	D	F	S	G	T	L	I	R	L	H	I	G	.	.	.	.	.	.	.	.	L	E	D	V	D	D	L	I	A	D	L	D	A	G	F	A	R	I	V
Query Conservation																																																			.	.	.	.	.	.	.	.
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.
Template Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	L	A	L	G	N	A	G	I	T	A	N	K	N	T	V	P	G	E	I	R	S	P	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	T	S	G	L	R	L	G	T	P	A	L	T	A	R	G	F	K	E	K	E	X	E	I	V	S	N	Y	I	A	D	I	L	D	D	V	N
Template Known Secondary structure								T	T									T	T			S		T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T		S												T	T																			T	T	T
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		327	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350																.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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