Job Description P06721 Confidence 99.96% Date Wed Jan 25 15:20:11 GMT 2012 Rank 76 Aligned Residues 353 % Identity 13% Template c3l8aB_ PDB info PDB header:lyase Chain: B: PDB Molecule:putative aminotransferase, probable beta-cystathionase; PDBTitle: crystal structure of metc from streptococcus mutans Resolution 1.54 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.					.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																																					.	.	.	.																																									.
Query SS confidence																																					.	.	.	.																																									.
Query Sequence		D	K	K	L	D	T	Q	L	V	N	A	G	R	S	K	K	Y	T	L	G	A	V	N	S	V	I	Q	R	A	S	S	L	V	F	D	.	.	.	.	S	V	E	A	K	K	H	A	T	R	N	R	A	N	G	E	L	F	Y	G	R	R	G	T	L	T	H	F	S	L	Q	Q	A	M	C	E	L	E	G	G	.
Query Conservation																																					.	.	.	.																																									.
Alig confidence																																					.	.	.	.																																									.
Template Conservation
Template Sequence		R	Y	D	F	T	T	R	P	D	R	L	N	Q	F	T	Y	K	W	K	T	S	E	N	N	P	E	L	L	Q	M	W	V	A	D	M	D	F	L	P	V	P	E	I	K	E	A	I	I	N	Y	G	R	E	H	I	F	G	Y	N	Y	F	N	D	D	L	Y	Q	A	V	I	D	W	E	R	K	E	H	D	Y	A
Template Known Secondary structure					S	S						T	T	T	T		T	T	T	G	G	G	T	T		T	T						S	S				S																			S	S
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
					78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.									.	.	.	.	140	.	.	.	.		.
Predicted Secondary structure		.	.	.																																																											.	.	.	.	.	.	.	.										.
Query SS confidence		.	.	.																																																											.	.	.	.	.	.	.	.										.
Query Sequence		.	.	.	A	G	C	V	L	F	P	C	G	A	A	A	V	A	N	S	I	L	A	F	I	E	Q	G	D	H	V	L	M	T	N	T	A	Y	E	P	S	Q	D	F	C	S	K	I	L	S	K	L	G	V	T	T	S	W	F	D	P	L	.	.	.	.	.	.	.	.	I	G	A	D	I	V	K	H	L	.	Q
Query Conservation		.	.	.																																																											.	.	.	.	.	.	.	.										.
Alig confidence		.	.	.																																					.	.	.	.																			.	.	.	.	.	.	.	.										.
Template Conservation																																									.	.	.	.
Template Sequence		V	V	K	E	D	I	L	F	I	D	G	V	V	P	A	I	S	I	A	L	Q	A	F	S	E	K	G	D	A	V	L	I	N	S	P	V	Y	Y	P	.	.	.	.	F	A	R	T	I	R	L	N	D	H	R	L	V	E	N	S	L	Q	I	I	N	G	R	F	E	I	D	F	E	Q	L	E	K	D	I	I	D
Template Known Secondary structure				G	G	G					S														S		T									S					.	.	.	.								T	T												T	T
Template Predicted Secondary structure																																									.	.	.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.					.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.		.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.											200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure																															.																										.	.	.	.	.	.	.	.	.	.
Query SS confidence																															.																										.	.	.	.	.	.	.	.	.	.
Query Sequence		P	N	T	K	I	V	F	L	E	S	P	G	S	I	T	M	E	V	H	D	V	P	A	I	V	A	A	V	R	.	S	V	V	P	D	A	I	I	M	I	D	N	T	W	A	A	G	V	L	F	K	A	L	D	F	.	.	.	.	.	.	.	.	.	.	G	I	D	V	S	I	Q	A	A	T	K	Y	L	V	G
Query Conservation																															.																										.	.	.	.	.	.	.	.	.	.
Alig confidence																															.																										.	.	.	.	.	.	.	.	.	.														.
Template Conservation																																																																																.
Template Sequence		N	N	V	K	I	Y	L	L	C	S	P	H	N	P	G	G	R	V	W	D	N	D	D	L	I	K	I	A	E	L	C	K	K	H	G	V	I	L	V	S	D	E	I	H	Q	D	L	A	L	F	G	N	T	H	H	S	L	N	T	L	D	A	S	Y	K	D	F	T	I	I	L	S	S	A	T	K	T	F	.	N
Template Known Secondary structure		T	T								S	S	B	T	T	T	T	B																		T								T	T	T	T		B		T	T						G	G	G	S		T	T	G	G	G	T							S					.	T
Template Predicted Secondary structure																																																																																.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.		.
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	S	D	A	M	I	G	T	A	V	C	N	A	R	C	W	E	Q	L	R	E	N	A	Y	L	M	G	Q	M	V	D	A	D	T	A	Y	I	T	S	R	G	L	R	T	L	G	V	R	L	R	Q	H	H	E	S	S	L	K	V	A	E	W	L	A	E	H	P	Q	V	A	R	V	N	H	P	A	L	P	G	S
Query Conservation
Alig confidence																																						.	.	.	.	.	.	.	.
Template Conservation																																						.	.	.	.	.	.	.	.
Template Sequence		I	A	G	T	K	N	S	F	A	I	I	Q	N	E	S	L	R	R	K	F	Q	Y	R	Q	L	A	N	N	Q	H	E	V	P	T	V	G	.	.	.	.	.	.	.	.	M	I	A	T	Q	A	A	F	Q	Y	G	K	P	W	L	E	E	L	K	T	V	I	E	G	N	I	K	L	V	I	K	E	L	E	A	K
Template Known Secondary structure			G	G	G									S														T	T		S							.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																						.	.	.	.	.	.	.	.
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.									.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
		295	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.			.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.
Predicted Secondary structure																								.	.
Query SS confidence																								.	.
Query Sequence		K	G	H	E	F	W	K	R	D	F	T	G	S	S	G	L	F	S	F	V	L	K	.	.	K	K	L	N	N	E	E	L	A	N	Y	L	D	N	F	S	L	F	S	M	A	Y	S	W	G	G	Y	E	S	L	I	L	A	N	Q	P	E	H	I	A	A	I	R	P	Q	G	E	I	D	F	S	G	T	L	I	R
Query Conservation																								.	.
Alig confidence											.	.	.											.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	K	I	K	V	M	E	P	E	.	.	.	G	T	Y	L	V	W	L	D	F	S	A	Y	A	I	A	Q	P	Q	L	S	E	K	L	Q	N	E	A	K	V	V	L	N	D	G	A	H	F	G	K	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	K	Y	F	A	R
Template Known Secondary structure		S	S							S	.	.	.	B	S	S							G	G	G	T			T	T									T	S							G	G	G	G		G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	T	T
Template Predicted Secondary structure											.	.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		310	.	.	.	.	.	.	.	.				.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.																							.	360	.	.	.	.
		373	.	.	.	.			.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.
Predicted Secondary structure							.	.
Query SS confidence							.	.
Query Sequence		L	H	I	G	L	.	.	E	D	V	D	D	L	I	A	D	L	D	A	G	F	A	R
Query Conservation							.	.
Alig confidence							.	.
Template Conservation
Template Sequence		L	N	V	A	T	P	K	N	T	V	Q	E	A	L	S	R	I	I	S	V	F	G	K
Template Known Secondary structure						S																S
Template Predicted Secondary structure
Template SS confidence
		365	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions