Phyre 2 alignment of P06721 with c3hvyC

Job Description P06721
Confidence 100.00% Date Wed Jan 25 15:20:11 GMT 2012

Rank 22 Aligned Residues 325

% Identity 14% Template c3hvyC_

PDB info PDB header:lyase Chain: C: PDB Molecule:cystathionine beta-lyase family protein, ynbb b.subtilis PDBTitle: crystal structure of putative cystathionine beta-lyase involved in2 aluminum resistance (np_348457.1) from clostridium acetobutylicum at3 2.00 a resolution

Resolution 2.00 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.				.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure																																			.	.	.																																					.	.	.	.	.	.	.
Query SS confidence																																			.	.	.																																					.	.	.	.	.	.	.
Query Sequence	R	A	N	G	E	L	F	Y	G	R	R	G	T	L	T	H	F	S	L	Q	Q	A	M	C	E	L	E	G	G	A	G	C	V	L	.	.	.	F	P	C	G	A	A	A	V	A	N	S	I	L	A	F	I	E	Q	G	D	H	V	L	M	T	N	T	A	Y	E	P	S	Q	D	F	C	.	.	.	.	.	.	.
Query Conservation																																			.	.	.																																					.	.	.	.	.	.	.
Alig confidence											.	.	.																						.	.	.																																					.	.	.	.	.	.	.
Template Conservation											.	.	.
Template Sequence	T	N	S	S	G	Y	G	Y	N	D	.	.	.	I	G	R	D	S	L	D	R	V	Y	A	N	I	F	N	T	E	S	A	F	V	R	P	H	F	V	N	G	T	H	A	I	G	A	A	L	F	G	N	L	R	P	N	D	T	X	X	S	I	C	G	X	P	Y	D	T	L	H	D	I	I	G	X	D	D	S	K
Template Known Secondary structure					T	T		T	T		.	.	.															T		S						T	T		S	S												T			T	T						S	S	S	S			G	G	G					T			T	T
Template Predicted Secondary structure											.	.	.
Template SS confidence
	63	.	.	.	.	.	.	70	.	.				.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.

		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.					.	.	.	.	140	.	.	.	.	.	.	.			.	.	150	.	.	.	.	.	.					.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
Predicted Secondary structure	.																		.	.	.	.													.	.										.	.	.	.
Query SS confidence	.																		.	.	.	.													.	.										.	.	.	.
Query Sequence	.	S	K	I	L	S	K	L	G	V	T	T	S	W	F	D	P	L	.	.	.	.	I	G	A	D	I	V	K	H	L	Q	P	N	.	.	T	K	I	V	F	L	E	S	P	.	.	.	.	G	S	I	T	M	E	V	H	D	V	P	A	I	V	A	A	V	R	S	V	V	P	D	A	I	I	M	I	D	N	T
Query Conservation	.																		.	.	.	.													.	.										.	.	.	.
Alig confidence	.																		.	.	.	.													.	.										.	.	.	.
Template Conservation
Template Sequence	K	V	G	S	L	R	E	Y	G	V	K	Y	K	X	V	D	L	K	D	G	K	V	D	I	N	T	V	K	E	E	L	K	K	D	D	S	I	K	L	I	H	I	Q	R	S	T	G	Y	G	W	R	K	S	L	R	I	A	E	I	A	E	I	I	K	S	I	R	E	V	N	E	N	V	I	V	F	V	D	N	C
Template Known Secondary structure		S			T	G	G	G	T									B	T	T	B														T	T								S	S			S	S	S	S																				S	S	S							T
Template Predicted Secondary structure
Template SS confidence
	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.

	188	.	190	.	.		.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.					.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
Predicted Secondary structure						.																																																		.	.	.	.
Query SS confidence						.																																																		.	.	.	.
Query Sequence	W	A	A	G	V	.	L	F	K	A	L	D	F	G	I	D	V	S	I	Q	A	A	T	K	Y	L	V	G	H	S	D	A	M	I	G	T	A	V	C	N	A	R	C	W	E	Q	L	R	E	N	A	Y	L	M	G	.	.	.	.	Q	M	V	D	A	D	T	A	Y	I	T	S	R	G	L	R	T	L	G	V	R
Query Conservation						.																																																		.	.	.	.
Alig confidence						.																																																		.	.	.	.
Template Conservation
Template Sequence	Y	G	E	F	V	E	E	K	E	P	T	D	V	G	A	D	I	I	A	G	S	L	I	K	N	I	G	G	G	I	A	T	T	G	G	Y	I	A	G	K	E	E	Y	V	T	Q	A	T	F	R	V	T	V	P	G	I	G	G	E	C	G	S	T	F	G	V	X	R	S	L	Y	E	G	L	F	X	A	P	H	V
Template Known Secondary structure	T	T	T	T	T	S	S	S		G	G	G	G	T		S						T	T	S	G	G	G	T	T	T			S																			S		T	T	T	G	G	G					T	T
Template Predicted Secondary structure
Template SS confidence
	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.

	263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	L	R	Q	H	H	E	S	S	L	K	V	A	E	W	L	A	E	H	P	Q	V	A	R	V	N	H	P	A	L	P	G	S	K	G	H	E	F	W	K	R	D	F	T	G	S	S	G	L	F	S	F	V	L	K	K	K	L	N	N	E	E	L	A	N	Y	L	D	N	F	S	L	F	S	M	A	Y	S	W	G	G
Query Conservation
Alig confidence																	.	.	.									.										.	.	.	.	.	.	.	.	.	.								.	.	.
Template Conservation																	.	.	.									.										.	.	.	.	.	.	.	.	.	.								.	.	.
Template Sequence	T	I	E	A	V	K	G	A	V	F	C	A	R	I	X	E	.	.	.	L	A	G	F	D	V	L	P	.	K	Y	N	D	K	R	T	D	I	.	.	.	.	.	.	.	.	.	.	I	Q	A	I	K	F	N	.	.	.	D	E	K	K	L	I	D	F	I	K	G	I	Q	T	A	S	P	V	D	S	F	V	Q
Template Known Secondary structure																	.	.	.			T					S	.		T	T	S			S	S	S	.	.	.	.	.	.	.	.	.	.								.	.	.	S														T		S	S	S	T	T
Template Predicted Secondary structure																	.	.	.									.										.	.	.	.	.	.	.	.	.	.								.	.	.
Template SS confidence
	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.				.	.	.	.	320	.	.	.		.	.	.	.	.	.	330	.	.											.	.	.	.	.	.	.				340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.

	343	.	.	.	.	.	.	350	.	.	.	.	.							.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.
Query Sequence	Y	E	S	L	I	L	A	N	Q	P	E	H	I	.	.	.	.	.	.	A	A	I	R	P	Q	G	E	I	D	F	S	G	T	L	I	R	L	H	I	G	L	E	D	V	D	D	L	I	A	D	L	D	A	G	F	A	R	I	V
Query Conservation														.	.	.	.	.	.
Alig confidence					.	.								.	.	.	.	.	.
Template Conservation					.	.
Template Sequence	C	E	A	W	.	.	D	K	V	I	X	A	A	G	T	F	V	Q	G	A	S	I	E	L	S	A	D	A	P	I	R	E	P	Y	I	G	Y	L	Q	G	G	L	T	F	D	H	A	K	L	G	V	L	I	A	L	S	K	L	I
Template Known Secondary structure					.	.										S	S	T	T		S	S	S	S						S		T	T									S	S													T	T	T
Template Predicted Secondary structure					.	.
Template SS confidence
	363	.	.	.			.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
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