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Job DescriptionP06721
Confidence100.00%DateWed Jan 25 15:20:11 GMT 2012
Rank27Aligned Residues224
% Identity17%Templatec3gwpA_
PDB info PDB header:lyaseChain: A: PDB Molecule:carbon-sulfur lyase involved in aluminum resistance; PDBTitle: crystal structure of carbon-sulfur lyase involved in aluminum2 resistance (yp_878183.1) from clostridium novyi nt at 2.90 a3 resolution
Resolution2.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   53......60.........70.........80.. .......90.........100.........110......... 120.
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Query Sequence  ELFYGRRGTLTHFSLQQAMCELEGGAGCVL. . . FPCGAAAVANSILAFIEQGDHVLMTNTAYEPSQDFCS. . . . . . . . KI
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Template Sequence  GYGYGDIG. . . RDSLDAVYARVFNTESALVRPHFVNGTHALGAALFGNLRPGNTXLSVCGEPYDTLHDVIGITENSNXGS
Template Known Secondary structure  TT
TT
...TT
S

BTT

S

TT
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TTTSS


TT

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   66...70... ......80.........90.........100.........110.........120.........130.........140..
 
   122.......130..... ....140.........150..... ....160.........170.........180.........190
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Query Sequence  LSKLGVTTSWFDPL. . . . . IGADIVKHLQPNTKIVFLES. . . . . . PGSITMEVHDVPAIVAAVRSVVPDAIIMIDNTWAA
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Template Sequence  LKEFGINYKQVDLKEDGKPNLEEIEKVLKEDESITLVHIQRSTGYGWRRALLIEDIKSIVDCVKNIRKDIICFVDNCYGE
Template Known Secondary structure  TGGGT


B
TTSSB

TT
S
TT
SS




TTS
TT
T
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   143......150.........160.........170.........180.........190.........200.........210.........220..
 
   191........200.........210.........220.........230.........240.........250.... .....260.....
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Query Sequence  . GVLFKALDFGIDVSIQAATKYLVGHSDAMIGTAVCNARCWEQLRENAYLMGQMVDADTAYITSR. . . . GLRTLGVRLRQ
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Template Sequence  FXDTKEPTDVGADLIAGSLIN. IGGGIAPTGGYLAGTKDCIEKTSYRLTVPGIGGECGSTFGVVRSXYQGLFLAPHISXE
Template Known Secondary structure  TSSSS
GGGGT
S


.TTTTT

S

S
TTTGGGS


TT
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   223......230.........240... ......250.........260.........270.........280.........290.........300.
 
   266...270.........280
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Query Sequence  HHESSLKVAEWLAEH
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Template Sequence  ALKGAILCSRIXELA
Template Known Secondary structure  T
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   303......310.......
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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