Job Description P06721 Confidence 99.94% Date Wed Jan 25 15:20:11 GMT 2012 Rank 130 Aligned Residues 288 % Identity 14% Template c3fkdC_ PDB info PDB header:lyase Chain: C: PDB Molecule:l-threonine-o-3-phosphate decarboxylase; PDBTitle: the crystal structure of l-threonine-o-3-phosphate2 decarboxylase from porphyromonas gingivalis Resolution 2.50 Å

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		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.			.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
Predicted Secondary structure																								.	.
Query SS confidence																								.	.
Query Sequence		Y	G	R	R	G	T	L	T	H	F	S	L	Q	Q	A	M	C	E	L	E	G	G	.	.	A	G	C	V	L	F	P	C	G	A	A	A	V	A	N	S	I	L	A	F	I	E	Q	G	D	H	V	L	M	T	N	T	A	Y	E	P	S	Q	D	F	C	S	K	I	L	S	K	L	G	V	T	T	S	W	F	D
Query Conservation																								.	.
Alig confidence																								.	.																					.	.															.	.	.	.
Template Conservation																																														.	.															.	.	.	.
Template Sequence		I	R	H	Y	P	E	P	D	A	G	T	L	R	Q	X	L	A	K	R	N	S	V	D	N	N	A	I	L	V	T	N	G	P	T	A	A	F	Y	Q	I	A	Q	A	F	.	.	R	G	S	R	S	L	I	A	I	P	S	F	A	E	.	.	.	.	Y	E	D	A	C	R	X	Y	E	H	E	V	C	F	Y	P
Template Known Secondary structure		G	G	S				T	T												T	T			G	G	G					S													T	.	.	T	T								S					.	.	.	.								T	T
Template Predicted Secondary structure																																														.	.															.	.	.	.
Template SS confidence
		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.			.	.	90	.	.	.	.	.	.	.	.	.	100	.					.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.							.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure																																																																		.	.	.	.	.	.
Query SS confidence																																																																		.	.	.	.	.	.
Query Sequence		P	L	I	G	A	D	I	V	K	H	L	Q	P	N	T	K	I	V	F	L	E	S	P	G	S	I	T	M	E	V	H	D	V	P	A	I	V	A	A	V	R	S	V	V	P	D	A	I	I	M	I	D	N	T	W	A	A	G	V	L	F	K	A	L	.	.	.	.	.	.	D	F	G	I	D	V	S	I	Q	A
Query Conservation																																																																		.	.	.	.	.	.
Alig confidence					.	.																																							.																					.	.	.	.	.	.
Template Conservation					.	.																																							.
Template Sequence		S	N	E	.	.	D	I	G	E	A	D	F	S	N	X	D	F	C	W	L	C	N	P	N	N	P	D	G	R	L	L	Q	R	T	E	I	L	R	L	L	N	D	H	.	P	D	T	T	F	V	L	D	Q	S	Y	V	S	F	T	T	E	E	V	I	R	P	A	D	I	K	G	R	K	N	L	V	X	V	Y	S
Template Known Secondary structure		T	T	S	.	.		G	G	G	S			T	T		S						S	S		T	T	T																	.	T	T	S							T	T	G	G	G		S	S					G	G	G	G	T	T		S	S
Template Predicted Secondary structure					.	.																																							.
Template SS confidence
		118	.	120			.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.		.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure																																												.
Query SS confidence																																												.
Query Sequence		A	T	K	Y	L	V	G	H	S	D	A	M	I	G	T	A	V	C	N	A	R	C	W	E	Q	L	R	E	N	A	Y	L	M	G	Q	M	V	D	A	D	T	A	.	Y	I	T	S	R	G	L	R	T	L	G	V	R	L	R	Q	H	H	E	S	S	L	K	V	A	E	W	L	A	E	H	P	Q	V	A	R	V
Query Conservation																																												.
Alig confidence							.																																					.																																		.	.	.	.
Template Conservation							.																																																																							.	.	.	.
Template Sequence		F	S	H	A	Y	.	G	I	P	G	L	R	I	G	Y	I	V	A	N	K	D	F	X	K	R	V	A	A	F	S	T	P	W	A	V	N	A	L	A	I	E	A	A	K	F	I	L	I	H	P	A	Q	F	T	L	P	I	R	K	W	Q	R	N	T	V	D	F	I	T	A	L	N	R	L	D	G	.	.	.	.
Template Known Secondary structure		S	T	T	T	S	.	S		G	G	G																	T	T			T	T		S																																							S	T	T	.	.	.	.
Template Predicted Secondary structure							.																																																																							.	.	.	.
Template SS confidence
		195	.	.	.	.		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
		287	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	H	P	A	L	P	G	S	K	G	H	E	F	W	K	R	D	F	T	G	S	S	G	L	F	S	F	V	L	K	K	K	L	N	N	E	E	L	A	N	Y	L	D	N	F	S	L	F	S	M	A	Y	S	W	G	G	Y	E	S	L	I	L	A	N	Q	P	E	H	I	A	A	I	R	P	Q	G	E	I	D	F
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	E	V	H	P	S	G	T	T	F	F	L	L	R	L	K	K	G	T	A	A	E	L	K	K	Y	X	L	E	E	.	.	.	Y	N	X	L	I	R	D	A	S	N	F	R	G	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.							S	S	S							S	S	S												T	.	.	.	T								T	T	S	T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.				300	.	.	.	.	.	.	.	.	.	310	.	.	.
		367	.	.	370	.	.	.	.	.	.	.		.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.
Predicted Secondary structure													.
Query SS confidence													.
Query Sequence		S	G	T	L	I	R	L	H	I	G	L	.	E	D	V	D	D	L	I	A	D	L	D	A	G	F	A	R
Query Conservation													.
Alig confidence													.
Template Conservation
Template Sequence		D	E	S	Y	V	R	I	T	T	Q	R	P	A	Q	N	Q	L	F	I	K	A	L	E	T	F	L	E	K
Template Known Secondary structure			T	T
Template Predicted Secondary structure
Template SS confidence
		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions