Phyre 2 alignment of P06721 with c3ffhA

Job Description P06721
Confidence 99.94% Date Wed Jan 25 15:20:11 GMT 2012

Rank 118 Aligned Residues 302

% Identity 12% Template c3ffhA_

PDB info PDB header:transferase Chain: A: PDB Molecule:histidinol-phosphate aminotransferase; PDBTitle: the crystal structure of histidinol-phosphate aminotransferase from2 listeria innocua clip11262.

Resolution 2.31 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.			.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure																																											.	.
Query SS confidence																																											.	.
Query Sequence	F	D	S	V	E	A	K	K	H	A	T	R	N	R	A	N	G	E	L	F	Y	G	R	R	G	T	L	T	H	F	S	L	Q	Q	A	M	C	E	L	E	G	G	.	.	A	G	C	V	L	F	P	C	G	A	A	A	V	A	N	S	I	L	A	F	I	E	Q	G	D	H	V	L	M	T	N	T	A	Y	E	P
Query Conservation																																											.	.
Alig confidence																							.	.	.	.	.	.	.														.	.
Template Conservation																							.	.	.	.	.	.	.
Template Sequence	L	G	T	S	K	K	V	A	A	I	Q	A	N	S	S	V	E	T	E	I	Y	A	.	.	.	.	.	.	.	S	S	L	R	K	E	V	A	D	F	Y	Q	L	E	E	E	E	L	I	F	T	A	G	V	D	E	L	I	E	L	L	T	R	V	L	L	D	T	T	T	N	T	V	X	A	T	P	T	F	V	Q
Template Known Secondary structure	T												T			S				B			.	.	.	.	.	.	.												T			G	G	G					S	S														S	T	T								S	S
Template Predicted Secondary structure																							.	.	.	.	.	.	.
Template SS confidence
	41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.								.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.

	114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.						.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.
Query SS confidence																							.	.	.	.	.
Query Sequence	S	Q	D	F	C	S	K	I	L	S	K	L	G	V	T	T	S	W	F	D	P	L	.	.	.	.	.	I	G	A	D	I	V	K	H	L	Q	P	N	T	K	I	V	F	L	E	S	P	G	S	I	T	M	E	V	H	D	V	P	A	I	V	A	A	V	R	S	V	V	P	D	A	I	I	M	I	D	N	T	W
Query Conservation																							.	.	.	.	.
Alig confidence						.	.	.	.														.	.	.	.	.
Template Conservation						.	.	.	.
Template Sequence	Y	R	Q	N	A	.	.	.	.	L	I	E	G	A	E	V	R	E	I	P	L	L	Q	D	G	E	H	D	L	E	G	X	L	N	A	I	D	E	K	T	T	I	V	W	I	C	N	P	N	N	P	T	G	N	Y	I	E	L	A	D	I	Q	A	F	L	D	R	V	P	S	D	V	L	V	V	L	D	E	A	Y
Template Known Secondary structure						.	.	.	.				T										T	T	S													T	T								S	S		T	T	T														T	T	S		T	T	S							T	T
Template Predicted Secondary structure						.	.	.	.
Template SS confidence
	118	.	120	.	.					.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.

	189	190	.	.	.	.	.	.							.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.		250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure									.	.	.	.	.	.																																																						.
Query SS confidence									.	.	.	.	.	.																																																						.
Query Sequence	A	A	G	V	L	F	K	A	.	.	.	.	.	.	L	D	F	G	I	D	V	S	I	Q	A	A	T	K	Y	L	V	G	H	S	D	A	M	I	G	T	A	V	C	N	A	R	C	W	E	Q	L	R	E	N	A	Y	L	M	G	Q	M	V	D	A	D	T	A	.	Y	I	T	S	R	G	L	R	T	L	G	V
Query Conservation									.	.	.	.	.	.																																																						.
Alig confidence									.	.	.	.	.	.																																																						.
Template Conservation
Template Sequence	I	E	Y	V	T	P	Q	P	E	K	H	E	K	L	V	R	T	Y	K	N	L	I	I	T	R	T	F	S	K	I	Y	G	L	A	S	A	R	V	G	Y	G	I	A	D	K	E	I	I	R	Q	L	N	I	V	R	P	P	F	N	T	T	S	I	G	Q	K	L	A	I	E	A	I	K	D	Q	A	F	I	G	E
Template Known Secondary structure	G	G	G		S	S						G	G	G	G	G	T		T	T							S	S	S	T	T			S	S																			T			S				B
Template Predicted Secondary structure
Template SS confidence
	194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.

	262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.
Predicted Secondary structure
Query SS confidence
Query Sequence	R	L	R	Q	H	H	E	S	S	L	K	V	A	E	W	L	A	E	H	P	Q	V	A	R	V	N	H	P	A	L	P	G	S	K	G	H	E	F	W	K	R	D	F	T	G	S	S	G	L	F	S	F	V	L	K	K	K	L	N	N	E	E	L	A	N	Y	L	D	N	F	S	L	F	S	M	A	Y	S	W	G
Query Conservation
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.
Template Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.
Template Sequence	C	R	T	S	N	A	N	G	I	K	Q	Y	E	A	F	A	K	R	F	E	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	K	L	Y	P	A	N	G	N	F	V	L	I	D	L	G	.	.	.	.	.	I	E	A	G	T	I	F	S	Y	L	E	K	N	G	Y	I	T	R	S	G
Template Known Secondary structure																				T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								S	S							S	.	.	.	.	.	S												T	T						T
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.
Template SS confidence
	274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.																			.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310						.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330

	342	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	G	Y	E	S	L	I	L	A	N	Q	P	E	H	I	A	A	I	R	P	Q	G	E	I	D	F	S	G	T	L	I	R	L	H	I	G	L	E	D	V	D	D	L	I	A	D	L	D	A	G	F	A	R	I	V
Query Conservation
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.
Template Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.
Template Sequence	A	A	L	G	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	T	A	V	R	I	T	I	G	.	.	.	K	E	E	D	N	S	A	V	I	A	L	L	E	K	L	L
Template Known Secondary structure	T	T	T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T								.	.	.
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.
Template SS confidence
	331	.	.	.	.																						.	.	.	.	340	.	.	.	.				.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
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