Job Description P06721 Confidence 100.00% Date Wed Jan 25 15:20:11 GMT 2012 Rank 23 Aligned Residues 320 % Identity 13% Template c3fd0B_ PDB info PDB header:lyase Chain: B: PDB Molecule:putative cystathionine beta-lyase involved in aluminum PDBTitle: crystal structure of putative cystathionine beta-lyase involved in2 aluminum resistance (np_470671.1) from listeria innocua at 2.12 a3 resolution Resolution 2.12 Å

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		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.				.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
Predicted Secondary structure																																				.	.	.																																									.	.	.
Query SS confidence																																				.	.	.																																									.	.	.
Query Sequence		R	A	N	G	E	L	F	Y	G	R	R	G	T	L	T	H	F	S	L	Q	Q	A	M	C	E	L	E	G	G	A	G	C	V	L	.	.	.	F	P	C	G	A	A	A	V	A	N	S	I	L	A	F	I	E	Q	G	D	H	V	L	M	T	N	T	A	Y	E	P	S	Q	D	F	C	S	K	I	L	.	.	.
Query Conservation																																				.	.	.																																									.	.	.
Alig confidence														.	.	.																				.	.	.																																									.	.	.
Template Conservation														.	.	.
Template Sequence		N	P	S	T	G	Y	G	Y	D	D	E	G	.	.	.	R	D	T	L	E	R	V	Y	A	S	V	F	K	T	E	A	A	L	V	R	P	Q	I	I	S	G	T	H	A	I	S	T	V	L	F	G	I	L	R	P	G	D	E	L	L	Y	I	T	G	E	P	Y	D	T	L	E	E	I	V	G	I	R	S	E	G
Template Known Secondary structure						T	T		T	T				.	.	.													T		S						T	T	S		S															T	T							S	S	S			T	T						T	S	S		S	S
Template Predicted Secondary structure														.	.	.
Template SS confidence
		48	.	50	.	.	.	.	.	.	.	.	.				60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
						123	.	.	.	.	.	.	130	.	.	.	.	.						.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.					.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.														.	.	.	.	.																						.	.	.	.
Query SS confidence		.	.	.	.														.	.	.	.	.																						.	.	.	.
Query Sequence		.	.	.	.	S	K	L	G	V	T	T	S	W	F	D	P	L	.	.	.	.	.	I	G	A	D	I	V	K	H	L	Q	P	N	T	K	I	V	F	L	E	S	P	.	.	.	.	G	S	I	T	M	E	V	H	D	V	P	A	I	V	A	A	V	R	S	V	V	P	D	A	I	I	M	I	D	N	T	W	A
Query Conservation		.	.	.	.														.	.	.	.	.																						.	.	.	.
Alig confidence		.	.	.	.														.	.	.	.	.																						.	.	.	.
Template Conservation
Template Sequence		Q	G	S	L	K	D	F	Q	I	G	Y	D	A	V	P	L	L	P	N	G	E	I	D	Y	P	A	V	S	K	K	I	S	A	N	T	K	X	I	G	I	Q	R	S	R	G	Y	A	D	R	P	S	F	T	I	E	K	I	K	E	X	V	T	F	V	K	N	I	N	P	N	I	I	V	F	V	D	N	C	Y	G
Template Known Secondary structure		S			T	G	G	G	T										T	T	S	S												T	T									S		T	T	S	S	S																				T	T	S							T	T	T
Template Predicted Secondary structure
Template SS confidence
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
		190	.	.		.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.					.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure					.																																																				.	.	.	.
Query SS confidence					.																																																				.	.	.	.
Query Sequence		A	G	V	.	L	F	K	A	L	D	F	G	I	D	V	S	I	Q	A	A	T	K	Y	L	V	G	H	S	D	A	M	I	G	T	A	V	C	N	A	R	C	W	E	Q	L	R	E	N	A	Y	L	M	G	Q	M	.	.	.	.	V	D	A	D	T	A	Y	I	T	S	R	G	L	R	T	L	G	V	R	L	R
Query Conservation					.																																																				.	.	.	.
Alig confidence					.																			.																																	.	.	.	.
Template Conservation																								.
Template Sequence		E	F	V	E	R	I	E	P	T	E	V	G	A	D	I	I	A	G	S	L	I	N	.	P	G	G	G	L	A	K	T	G	G	Y	I	A	G	R	N	T	L	V	D	L	C	G	Y	R	L	T	T	P	G	I	G	R	E	A	G	A	S	L	Y	S	L	L	E	X	Y	Q	G	F	F	L	A	P	H	V	T	A
Template Known Secondary structure		T	T	T	S	S			G	G	G	T	T		S									.	T	T	T	T	T			S																			S		T	T	T	G	G	G					T	T
Template Predicted Secondary structure																								.
Template SS confidence
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.		.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	H	H	E	S	S	L	K	V	A	E	W	L	A	E	H	P	Q	V	A	R	V	N	H	P	A	L	P	G	S	K	G	H	E	F	W	K	R	D	F	T	G	S	S	G	L	F	S	F	V	L	K	K	K	L	N	N	E	E	L	A	N	Y	L	D	N	F	S	L	F	S	M	A	Y	S	W	G	G	Y	E
Query Conservation
Alig confidence																		.	.	.	.	.	.	.	.	.																.	.	.	.	.								.	.	.																						.	.	.	.
Template Conservation																		.	.	.	.	.	.	.	.	.																.	.	.	.	.								.	.	.																						.	.	.	.
Template Sequence		Q	A	I	K	G	A	R	F	T	A	A	X	L	A	E	F	.	.	.	.	.	.	.	.	.	G	V	E	A	D	P	L	W	D	A	K	R	T	D	L	.	.	.	.	.	I	Q	S	V	S	F	H	.	.	.	S	K	D	K	X	I	A	F	A	Q	A	I	Q	A	A	S	P	V	N	A	H	.	.	.	.
Template Known Secondary structure																	T	.	.	.	.	.	.	.	.	.	T					S		T	T	S			S	S	S	.	.	.	.	.							S	.	.	.															T	S	S	S	S	T	T	.	.	.	.
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.																.	.	.	.	.								.	.	.																						.	.	.	.
Template SS confidence
		285	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300										.	.	.	.	.	.	.	.	.	310	.	.	.	.	.						.	.	.	.	320	.	.				.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
		345	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.			.	.	.	.	370	.	.	.	.	.															.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.
Predicted Secondary structure																							.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	L	I	L	A	N	Q	P	E	H	I	A	A	I	R	P	Q	G	E	I	D	.	.	F	S	G	T	L	I	R	L	H	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	L	E	D	V	D	D	L	I	A	D	L	D	A	G	F	A	R	I	V
Query Conservation																							.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.																					.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.			.
Template Conservation		.																																																	.
Template Sequence		.	V	L	P	I	G	A	Y	X	P	G	Y	E	D	D	V	I	X	A	A	G	T	F	I	Q	G	A	S	L	E	L	T	A	D	G	P	I	R	E	P	Y	Q	L	Y	V	Q	G	G	L	.	T	Y	E	H	V	K	I	A	V	T	R	A	I	E	N	S	L
Template Known Secondary structure		.	S					B			T	T		S	S									S	S	T	T		S	S	S							S	S	T	T	T								S	.	S
Template Predicted Secondary structure		.																																																	.
Template SS confidence
			344	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.		.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions