Job Description P06721 Confidence 99.93% Date Wed Jan 25 15:20:11 GMT 2012 Rank 147 Aligned Residues 309 % Identity 12% Template c3ez1A_ PDB info PDB header:transferase Chain: A: PDB Molecule:aminotransferase mocr family; PDBTitle: crystal structure of putative aminotransferase (mocr family)2 (yp_604413.1) from deinococcus geothermalis dsm 11300 at 2.60 a3 resolution Resolution 2.60 Å

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		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.			.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.														.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																										.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	F	Y	G	R	R	G	T	L	T	H	F	S	L	Q	Q	A	M	C	E	L	E	G	G	.	.	A	G	C	V	L	F	P	C	G	A	A	A	V	A	N	S	I	.	.	.	.	.	.	.	.	.	.	.	.	.	L	A	F	I	E	Q	G	D	H	V	L	M	T	N	T	A	Y	E	P	S	Q	D	F	C
Query Conservation																										.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.													.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.	.
Template Sequence		Y	P	G	G	V	A	G	L	P	.	.	.	S	A	R	A	L	F	A	G	Y	L	D	V	K	A	E	N	V	L	V	W	N	N	S	S	L	E	L	Q	G	L	V	L	T	F	A	L	L	H	G	V	R	G	S	T	G	P	W	L	S	Q	T	P	K	X	I	V	T	V	P	G	Y	D	R	H	F	L	L	L
Template Known Secondary structure		S		S		T	T				.	.	.										T	T	S		G	G	G					S	S																T			T	T		S	S		G	G	G	G									S
Template Predicted Secondary structure											.	.	.
Template SS confidence
		64	.	.	.	.	.	70	.	.				.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.								.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.			.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.																																							.	.
Query SS confidence																				.	.	.	.	.	.	.																																							.	.
Query Sequence		S	K	I	L	S	K	L	G	V	T	T	S	W	F	D	P	L	I	.	.	.	.	.	.	.	G	A	D	I	V	K	H	L	Q	P	N	T	K	I	V	F	L	E	S	P	G	S	I	T	M	E	V	H	D	V	P	A	I	V	A	A	V	R	.	.	S	V	V	P	D	A	I	I	M	I	D	N	T	W	A
Query Conservation																				.	.	.	.	.	.	.																																							.	.
Alig confidence		.	.	.	.															.	.	.	.	.	.	.																																							.	.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	Q	T	L	G	F	E	L	L	T	V	D	X	Q	S	D	G	P	D	V	D	A	V	E	R	L	A	G	T	D	P	S	V	K	G	I	L	F	V	P	T	Y	S	N	P	G	G	E	T	I	S	L	E	K	A	R	R	L	A	G	L	Q	A	A	A	P	D	F	T	I	F	A	D	D	A	Y	R
Template Known Secondary structure		.	.	.	.				T										T	T													S		T	T								S	S	S		T	T	T														T				S	S	T	T								T	T	S
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
		190	.	.	.	.	.	.	.	.	.																200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	G	V	L	F	K	A	L	D	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	I	D	V	S	I	Q	A	A	T	K	Y	L	V	G	H	S	D	A	M	I	G	T	A	V	C	N	A	R	C	W	E	Q	L	R	E	N	A	Y	L	M	G	Q	M	V	D	A	D	T	A	Y	I	T	S	R
Query Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.
Template Conservation																																									.	.
Template Sequence		V	H	H	L	V	E	E	D	R	A	E	P	V	N	F	V	V	L	A	R	D	A	G	Y	P	D	R	A	F	V	F	A	S	T	S	K	I	T	F	.	.	A	G	A	G	L	G	F	V	A	S	S	E	D	N	I	R	W	L	S	K	Y	L	G	A	Q	S	I	G	P	N	K	V	E	Q	A	R	H	V	K
Template Known Secondary structure		S		B			S	S	S															T		T	T	S							S	T	T	T	S		.	.	S	S	S	S																					S		S
Template Predicted Secondary structure																																									.	.
Template SS confidence
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.			.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	R	T	L	G	V	R	L	R	Q	H	H	E	S	S	L	K	V	A	E	W	L	A	E	H	P	Q	V	A	R	V	N	H	P	A	L	P	G	S	K	G	H	E	F	W	K	R	D	F	T	G	S	S	G	L	F	S	F	V	L	K	K	K	L	N	N	E	E	L	A	N	Y	L	D	N	F	S	L	F
Query Conservation
Alig confidence																					.	.																																		.	.											.	.	.	.
Template Conservation																					.	.																																		.	.											.	.	.	.
Template Sequence		F	L	T	E	Y	P	G	G	L	E	G	L	X	R	D	H	A	A	I	.	.	I	A	P	K	F	R	A	V	D	E	V	L	R	A	E	L	G	E	G	G	E	Y	A	T	W	T	L	P	K	G	G	Y	F	.	.	I	S	L	D	T	A	E	P	V	A	.	.	.	.	D	R	V	V	K	L	A	E	A	A
Template Known Secondary structure						S	T	T													.	.																	T	T	T	T	S	S							S	B	S	S		.	.						S	S	S			.	.	.	.										T
Template Predicted Secondary structure																					.	.																																		.	.											.	.	.	.
Template SS confidence
		295	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.			.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.			.	.	.	350	.	.	.	.	.	.					.	.	.	360	.	.	.	.	.	.
		335	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	M	A	Y	S	W	G	G	Y	E	S	L	I	L	A	N	Q	P	E	H	I	A	A	I	R	P	Q	G	E	I	D	F	S	G	T	L	I	R	L	H	I	G	L	E	D	V	D	D	L	I	A	D	L	D	A	G	F	A	R	I	V
Query Conservation
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.
Template Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.
Template Sequence		G	V	S	L	T	P	A	G	A	T	Y	P	A	G	Q	D	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	N	R	N	L	R	L	A	P	T	R	P	P	V	E	E	V	R	T	A	X	.	Q	V	V	A	A	C	I
Template Known Secondary structure		T						T	T	T	T	S	S	T	T			S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S								S	S	S										.
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.
Template SS confidence
		367	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.																.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.		.	.	.	.	.	410	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions