Job Description P06721 Confidence 100.00% Date Wed Jan 25 15:20:11 GMT 2012 Rank 31 Aligned Residues 354 % Identity 12% Template c3dr4B_ PDB info PDB header:transferase Chain: B: PDB Molecule:putative perosamine synthetase; PDBTitle: gdp-perosamine synthase k186a mutant from caulobacter2 crescentus with bound sugar ligand Resolution 1.60 Å

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		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.		.	.	100	.
Predicted Secondary structure																																																																													.
Query SS confidence																																																																													.
Query Sequence		A	V	N	S	V	I	Q	R	A	S	S	L	V	F	D	S	V	E	A	K	K	H	A	T	R	N	R	A	N	G	E	L	F	Y	G	R	R	G	T	L	T	H	F	S	L	Q	Q	A	M	C	E	L	E	G	G	A	G	C	V	L	F	P	C	G	A	A	A	V	A	N	S	I	L	A	F	.	I	E	Q	G
Query Conservation																																																																													.
Alig confidence							.	.	.	.	.																		.	.	.	.							.	.																																					.
Template Conservation							.	.	.	.	.																		.	.	.	.							.	.
Template Sequence		S	V	A	A	P	.	.	.	.	.	R	L	D	G	N	E	R	D	Y	V	L	E	C	M	D	T	T	.	.	.	.	W	I	S	S	V	G	.	.	R	F	I	V	E	F	E	K	A	F	A	D	Y	C	G	V	K	H	A	I	A	C	N	N	G	T	T	A	L	H	L	A	L	V	A	M	G	I	G	P	G
Template Known Secondary structure			S				.	.	.	.	.				S	S												T	.	.	.	.			S	S		S	.	.															T		S						S														T			T	T
Template Predicted Secondary structure							.	.	.	.	.																		.	.	.	.							.	.
Template SS confidence
		8	.	10	.	.						.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.					30	.	.	.	.	.			.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.				.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure																																				.	.	.
Query SS confidence																																				.	.	.
Query Sequence		D	H	V	L	M	T	N	T	A	Y	E	P	S	Q	D	F	C	S	K	I	L	S	K	L	G	V	T	T	S	W	F	D	P	L	.	.	.	I	G	A	D	I	V	K	H	L	Q	P	N	T	K	I	V	F	L	E	S	P	G	S	I	T	M	E	V	H	D	V	P	A	I	V	A	A	V	R	S	V	V	P
Query Conservation																																				.	.	.
Alig confidence																			.	.	.	.														.	.	.																																										.	.
Template Conservation																			.	.	.	.																																																										.	.
Template Sequence		D	E	V	I	V	P	S	L	T	Y	I	A	S	A	N	S	V	.	.	.	.	T	Y	C	G	A	T	P	V	L	V	D	N	D	P	R	T	F	N	L	D	A	A	K	L	E	A	L	I	T	P	R	T	K	A	I	M	P	V	H	L	Y	G	Q	I	C	D	M	D	P	I	L	E	V	A	R	R	H	.	.
Template Known Secondary structure								S	S	S		T							.	.	.	.			T	T								B		T	T	T		S	B		G	G	G	T	G	G	G			T	T							B		G	G	G															T	.	.
Template Predicted Secondary structure																			.	.	.	.																																																										.	.
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.					.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.			.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure																					.	.
Query SS confidence																					.	.
Query Sequence		D	A	I	I	M	I	D	N	T	W	A	A	G	V	L	F	K	A	L	.	.	D	F	G	I	D	V	S	I	Q	A	A	T	K	Y	L	V	G	H	S	D	A	M	I	G	T	A	V	C	N	A	R	C	W	E	Q	L	R	E	N	A	Y	L	M	G	Q	M	V	D	A	D	T	A	Y	I	T	S	R	G	L
Query Conservation																					.	.
Alig confidence																					.	.
Template Conservation
Template Sequence		N	L	L	V	I	E	D	A	A	E	A	V	G	A	T	Y	R	G	K	K	S	G	S	L	G	D	C	A	T	F	S	F	F	G	N	A	I	I	T	T	G	E	G	G	M	I	T	T	N	D	D	D	L	A	A	K	M	R	L	L	R	G	Q	G	M	D	P	N	R	R	Y	W	F	P	I	V	G	F	N	Y
Template Known Secondary structure		T								T	T		T	T				T	T			T	T	S	S	S	S							B	T	T	S	S	S			B	S							S													B	T	T			T	T	S	T	T			S	S				B
Template Predicted Secondary structure
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.				300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
Predicted Secondary structure																																													.	.	.
Query SS confidence																																													.	.	.
Query Sequence		R	T	L	G	V	R	L	R	Q	H	H	E	S	S	L	K	V	A	E	W	L	A	E	H	P	Q	V	A	R	V	N	H	P	A	L	P	G	S	K	G	H	E	F	.	.	.	W	K	R	D	F	T	G	S	S	G	L	F	S	F	V	L	K	K	K	L	N	N	E	E	L	A	N	Y	L	D	N	F	S	L
Query Conservation																																													.	.	.
Alig confidence																																													.	.	.																							.
Template Conservation																																																																						.
Template Sequence		R	M	T	N	I	Q	A	A	I	G	L	A	Q	L	E	R	V	D	E	H	L	A	A	R	E	R	V	V	G	W	Y	E	Q	K	L	A	R	L	G	N	R	V	T	K	P	H	V	A	L	T	G	R	H	V	F	W	M	Y	T	V	R	L	G	E	G	L	S	T	.	T	R	D	Q	V	I	K	D	L	D	A
Template Known Secondary structure		B															T																			G	G	G	G	G	G	G								T	T	S					S	S							T	T		S	S	.
Template Predicted Secondary structure																																																																						.
Template SS confidence
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.		.	300	.	.	.	.	.	.	.	.	.
		334	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	S	M	A	Y	S	W	G	G	Y	E	S	L	I	L	A	N	Q	P	E	H	I	A	A	I	R	P	Q	G	E	I	D	F	S	G	T	L	I	R	L	H	I	G	L	E	D	V	D	D	L	I	A	D	L	D	A	G	F	A	R	I	V
Query Conservation
Alig confidence																																	.
Template Conservation																																	.
Template Sequence		L	G	I	E	S	R	P	V	F	H	P	M	H	I	M	P	P	Y	A	H	L	A	T	D	D	L	K	I	A	E	A	.	C	G	V	D	G	L	N	L	P	T	H	A	G	L	T	E	A	D	I	D	R	V	I	A	A	L	D	Q	V	L
Template Known Secondary structure		T	T	B									G	G	G	S	G	G	G	G	G	G			T	T							.												T	T
Template Predicted Secondary structure																																	.
Template SS confidence
		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340		.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions