Job Description P06721 Confidence 99.95% Date Wed Jan 25 15:20:11 GMT 2012 Rank 113 Aligned Residues 307 % Identity 12% Template c3dc1A_ PDB info PDB header:transferase Chain: A: PDB Molecule:kynurenine/alpha-aminoadipate aminotransferase PDBTitle: crystal structure of kynurenine aminotransferase ii complex with2 alpha-ketoglutarate Resolution 2.50 Å

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		58	.	60	.	.	.		.	.	.	.	.	.	70	.	.	.	.	.																.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure								.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence								.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	R	G	T	L	T	.	H	F	S	L	Q	Q	A	M	C	E	L	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	A	G	C	V	L	F	P	C	G	A	A	A	V	A	N	S	I	L	A	F	I	E	Q	G	D	H	V	L	M	T	N	T	A	Y	E	P	S	Q	D	F	C	S	K	I
Query Conservation								.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																												.	.	.
Template Conservation																																																																															.	.	.
Template Sequence		Q	Y	S	P	S	A	G	I	P	E	L	L	S	W	L	K	Q	L	Q	I	K	L	H	N	P	P	T	I	H	Y	P	P	S	Q	G	Q	M	D	L	C	V	T	S	G	S	Q	Q	G	L	C	K	V	F	E	M	I	I	N	P	G	D	N	V	L	L	D	E	P	A	Y	S	G	T	L	Q	S	L	.	.	.
Template Known Secondary structure		S				T	T																	T			T	T	T	T	S		G	G	G	T								S	S															T	T							S	S										.	.	.
Template Predicted Secondary structure																																																																															.	.	.
Template SS confidence
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
		122	.	.	.	.	.	.	.	130	.	.	.	.	.					.	.	.	.	140	.	.	.	.	.													.	.	.	.	150	.	.	.	.		.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.		.	.	.	.	.	180	.	.	.
Predicted Secondary structure																.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.										.																					.
Query SS confidence																.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.										.																					.
Query Sequence		L	S	K	L	G	V	T	T	S	W	F	D	P	L	.	.	.	.	I	G	A	D	I	V	K	H	L	Q	.	.	.	.	.	.	.	.	.	.	.	.	P	N	T	K	I	V	F	L	E	.	S	P	G	S	I	T	M	E	V	H	D	V	P	A	I	V	A	A	V	R	.	S	V	V	P	D	A	I	I	M
Query Conservation																.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.										.																					.
Alig confidence		.														.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.										.																					.
Template Conservation		.
Template Sequence		.	H	P	L	G	C	N	I	I	N	V	A	S	D	E	S	G	I	V	P	D	S	L	R	D	I	L	S	R	W	K	P	E	D	A	K	N	P	Q	K	N	T	P	K	F	L	Y	T	V	P	N	G	N	N	P	T	G	N	S	L	T	S	E	R	K	K	E	I	Y	E	L	A	R	K	Y	D	F	L	I	I
Template Known Secondary structure		.	G	G	G	T										T	T												T	T	S		G	G	G	G	S		G	G	G				S							S	S		T	T	T																				T
Template Predicted Secondary structure		.
Template SS confidence
			150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
		184	.	.	.	.	.	190	.	.	.	.	.	.	.							.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.
Query Sequence		I	D	N	T	W	A	A	G	V	L	F	K	A	L	.	.	.	.	.	.	D	F	G	I	D	V	S	I	Q	A	A	T	K	Y	L	V	G	H	S	D	A	M	I	G	T	A	V	C	N	A	R	C	W	E	Q	L	R	E	N	A	Y	L	M	G	Q	M	V	D	A	D	T	A	Y	I	T	S	R	G	L	R
Query Conservation																.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.																.
Template Conservation																																					.
Template Sequence		E	D	D	P	Y	Y	F	L	Q	F	N	K	F	R	V	P	T	F	L	S	M	D	V	D	G	R	V	I	R	A	D	S	F	S	I	.	I	S	S	G	L	R	I	G	F	L	T	G	P	K	P	L	I	E	R	V	I	L	H	I	Q	V	S	T	L	H	P	S	T	F	N	Q	L	M	I	S	Q	L	L	H
Template Known Secondary structure					T	T	T	T		B	S	S	S	S					S	G	G	G		S	S	S											.			S	T	T																				T	T	T	T		S	S
Template Predicted Secondary structure																																					.
Template SS confidence
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.		.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
		258			.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
Predicted Secondary structure			.	.
Query SS confidence			.	.
Query Sequence		T	.	.	L	G	V	R	L	R	Q	H	H	E	S	S	L	K	V	A	E	W	L	A	E	H	P	Q	V	A	R	V	N	H	P	A	L	P	G	S	K	G	H	E	F	W	K	R	D	F	T	G	S	S	G	L	F	S	F	V	L	K	K	K	L	N	N	E	E	L	A	N	Y	L	D	N	F	S	L	F	S
Query Conservation			.	.
Alig confidence			.	.																																		.	.	.	.	.	.	.	.																								.	.
Template Conservation																																						.	.	.	.	.	.	.	.																								.	.
Template Sequence		E	W	G	E	E	G	F	M	A	H	V	D	R	V	I	D	F	Y	S	N	Q	K	D	A	I	L	A	A	A	D	K	W	L	T	G	L	.	.	.	.	.	.	.	.	A	E	W	H	V	P	A	A	G	M	F	L	W	I	K	V	K	G	I	N	D	V	K	.	.	E	L	I	E	E	K	A	V	K	M	G
Template Known Secondary structure																																			B	T	T	.	.	.	.	.	.	.	.							S	B	S	S							T	T		S		S		.	.					T					T	T
Template Predicted Secondary structure																																						.	.	.	.	.	.	.	.																								.	.
Template SS confidence
		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.									.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.			.	.	370	.	.	.	.	.	.	.	.
		336	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.				.	.	.	.	.	.	390	.	.	.	.	.
Predicted Secondary structure																																																		.	.	.
Query SS confidence																																																		.	.	.
Query Sequence		M	A	Y	S	W	G	G	Y	E	S	L	I	L	A	N	Q	P	E	H	I	A	A	I	R	P	Q	G	E	I	D	F	S	G	T	L	I	R	L	H	I	G	L	E	D	V	D	D	L	.	.	.	I	A	D	L	D	A	G	F	A	R	I	V
Query Conservation																																																		.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.
Template Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	L	M	L	P	G	N	A	F	Y	V	D	S	S	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	S	P	Y	L	R	A	S	F	S	S	A	S	P	E	Q	M	D	V	A	F	Q	V	L	A	Q	L	I	K	E	S	L
Template Known Secondary structure							G	G	G	G	S	S	S	T	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										S	S
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		379	380	.	.	.	.	.	.	.	.	.	390	.	.	.																	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions