Job Description P06721 Confidence 99.83% Date Wed Jan 25 15:20:11 GMT 2012 Rank 220 Aligned Residues 308 % Identity 12% Template c2z61A_ PDB info PDB header:transferase Chain: A: PDB Molecule:probable aspartate aminotransferase 2; PDBTitle: crystal structure of mj0684 from methanococcus jannaschii2 reveals its similarity in the active site to kynurenine3 aminotransferases Resolution 2.20 Å

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		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.					.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure																																							.	.	.	.
Query SS confidence																																							.	.	.	.
Query Sequence		E	A	K	K	H	A	T	R	N	R	A	N	G	E	L	F	Y	G	R	R	G	T	L	T	H	F	S	L	Q	Q	A	M	C	E	L	E	G	.	.	.	.	G	A	G	C	V	L	F	P	C	G	A	A	A	V	A	N	S	I	L	A	F	I	E	Q	G	D	H	V	L	M	T	N	T	A	Y	E	P	S	Q
Query Conservation																																							.	.	.	.
Alig confidence															.																								.	.	.	.																																						.	.
Template Conservation															.																																																																	.	.
Template Sequence		D	E	G	I	K	S	L	K	E	G	K	T	H	.	Y	T	D	S	R	G	I	L	E	L	R	E	K	I	S	E	L	Y	K	D	K	Y	K	A	D	I	I	P	D	N	I	I	I	T	G	G	S	S	L	G	L	F	F	A	L	S	S	I	I	D	D	G	D	E	V	L	I	Q	N	P	C	Y	P	C	.	.
Template Known Secondary structure										T	T			S	.				T	T																	S	S					G	G	G					S	S															T	T							S	S			T		.	.
Template Predicted Secondary structure															.																																																																	.	.
Template SS confidence
		49	50	.	.	.	.	.	.	.	.	.	60	.		.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	F	C	S	K	I	L	S	K	L	G	V	T	T	S	W	F	D	P	L	I	G	A	D	I	V	K	H	L	Q	P	N	T	K	I	V	F	L	E	S	P	G	S	I	T	M	E	V	H	D	V	P	A	I	V	A	A	V	R	S	V	V	P	D	A	I	I	M	I	D	N	T	W	A	A	G	V	L	F	K
Query Conservation
Alig confidence		.	.																	.																																.											.	.
Template Conservation		.	.																	.																																.											.	.
Template Sequence		.	.	Y	K	N	F	I	R	F	L	G	A	K	P	V	F	C	D	.	F	T	V	E	S	L	E	E	A	L	S	D	K	T	K	A	I	I	I	N	S	P	S	N	P	L	G	E	V	I	D	.	R	E	I	Y	E	F	A	Y	E	N	.	.	I	P	Y	I	I	S	D	E	I	Y	N	G	L	V	Y	E	G
Template Known Secondary structure		.	.								T	T								.	S	S										S	S								S	S		T	T	T						.											.	.		S							T	T	T	T		B	S	S	S
Template Predicted Secondary structure		.	.																	.																																.											.	.
Template SS confidence
				126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.		.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.		.	.	.	.	.	.	.	180	.	.			.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
		196	.	.	.	200							.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
Predicted Secondary structure							.	.	.	.	.	.
Query SS confidence							.	.	.	.	.	.
Query Sequence		A	L	D	F	G	.	.	.	.	.	.	I	D	V	S	I	Q	A	A	T	K	Y	L	V	G	H	S	D	A	M	I	G	T	A	V	C	N	A	R	C	W	E	Q	L	R	E	N	A	Y	L	M	G	Q	M	V	D	A	D	T	A	Y	I	T	S	R	G	L	R	T	L	G	V	R	L	R	Q	H	H	E	S
Query Conservation							.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.																																																										.	.
Template Conservation																																																																						.	.
Template Sequence		K	C	Y	S	A	I	E	F	D	E	N	L	E	K	T	I	L	I	N	G	F	S	L	Y	A	M	T	G	W	R	I	G	Y	V	I	S	N	D	E	I	I	E	A	I	L	K	L	Q	Q	N	L	F	I	S	A	P	T	I	S	Q	Y	A	A	L	K	A	F	E	.	.	K	E	T	E	R	E	I	N	S	M
Template Known Secondary structure						G	G	G	T		T	T		S	S													G	G	G																							T	S	S	S									G	G	G	G	S	.	.
Template Predicted Secondary structure																																																																						.	.
Template SS confidence
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.			.	.	270	.	.	.	.	.	.	.
		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	K	V	A	E	W	L	A	E	H	P	Q	V	A	R	V	N	H	P	A	L	P	G	S	K	G	H	E	F	W	K	R	D	F	T	G	S	S	G	L	F	S	F	V	L	K	K	K	L	N	N	E	E	L	A	N	Y	L	D	N	F	S	L	F	S	M	A	Y	S	W	G	G	Y	E	S	L	I	L	A
Query Conservation
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																			.	.
Template Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																			.	.
Template Sequence		I	K	E	F	D	R	R	R	R	L	V	L	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	V	K	D	F	G	W	E	V	N	N	P	I	G	A	Y	Y	V	F	P	N	I	G	E	D	G	R	E	F	A	Y	K	L	L	K	E	K	F	V	A	L	T	P	G	I	G	F	G	S	K	.	.
Template Known Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					T	T		B						B	T	T					B		S	S																				G	G	G	G		G	G	.	.
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																			.	.
Template SS confidence
		279	280	.	.	.	.	.	.	.	.	.	290	.																.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.
		350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.			.	.	380	.	.	.	.	.	.	.	.	.	390	.	.
Predicted Secondary structure																														.	.
Query SS confidence																														.	.
Query Sequence		N	Q	P	E	H	I	A	A	I	R	P	Q	G	E	I	D	F	S	G	T	L	I	R	L	H	I	G	L	.	.	E	D	V	D	D	L	I	A	D	L	D	A	G	F	A
Query Conservation																														.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	K	N	Y	I	R	I	S	Y	A	N	S	Y	E	N	I	K	E	G	L	E	R	I	K	E	F	L	N
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	S	S	B							S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																			342	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions