Job Description P06721 Confidence 99.91% Date Wed Jan 25 15:20:11 GMT 2012 Rank 182 Aligned Residues 310 % Identity 12% Template c2pb2B_ PDB info PDB header:transferase Chain: B: PDB Molecule:acetylornithine/succinyldiaminopimelate aminotransferase; PDBTitle: structure of biosynthetic n-acetylornithine aminotransferase from2 salmonella typhimurium: studies on substrate specificity and3 inhibitor binding Resolution 1.91 Å

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		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.									.	.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																													.	.	.	.	.	.	.	.
Query SS confidence																																																													.	.	.	.	.	.	.	.
Query Sequence		S	V	E	A	K	K	H	A	T	R	N	R	A	N	G	E	L	F	Y	G	R	R	G	T	L	T	H	F	S	L	Q	Q	A	M	C	E	L	E	G	G	A	G	C	V	L	F	P	C	G	A	A	A	V	A	N	S	I	L	A	.	.	.	.	.	.	.	.	F	I	E	Q	G	D	H	V	L	M	T	N	T
Query Conservation																																																													.	.	.	.	.	.	.	.
Alig confidence																																																													.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		H	P	A	L	V	E	A	L	K	S	Q	G	E	T	L	W	H	T	S	N	V	F	T	N	E	P	A	L	R	L	G	R	K	L	I	D	A	T	F	A	E	R	V	L	F	M	N	S	G	T	E	A	N	E	T	A	F	K	L	A	R	H	Y	A	C	V	R	H	S	P	F	K	T	K	I	I	A	F	H	N
Template Known Secondary structure														T	T						T	T	S																S	S		S						S	S																				T		T	T								T	T
Template Predicted Secondary structure
Template SS confidence
		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
		110	.	.	.	.	.	.	.	.	.	120	.	.	.										.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.					.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.																																											.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.																																											.	.	.	.
Query Sequence		A	Y	E	P	S	Q	D	F	C	S	K	I	L	S	.	.	.	.	.	.	.	.	.	K	L	G	V	T	T	S	W	F	D	P	L	I	G	A	D	I	V	K	H	L	Q	P	N	T	K	I	V	F	L	E	S	P	G	S	I	T	M	E	V	H	D	.	.	.	.	V	P	A	I	V	A	A	V	R	S	V
Query Conservation																.	.	.	.	.	.	.	.	.																																											.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.																																											.	.	.	.
Template Conservation
Template Sequence		A	F	H	G	R	S	L	F	T	V	S	V	G	G	Q	P	K	Y	S	D	G	F	G	P	K	P	A	D	I	I	H	V	P	F	N	D	L	H	A	V	K	A	V	M	D	D	H	T	C	A	V	V	V	E	P	I	Q	G	E	G	G	V	Q	A	A	T	P	E	F	L	K	G	L	R	D	L	C	D	E	H
Template Known Secondary structure						S	S							S	S						T	T	S	S	S			S							T	T											T	T								S			T	T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
		177	.	.	180	.	.	.	.	.	.	.	.	.					190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure															.	.	.	.
Query SS confidence															.	.	.	.
Query Sequence		V	P	D	A	I	I	M	I	D	N	T	W	A	.	.	.	.	A	G	V	L	F	K	A	L	D	F	G	I	D	V	S	I	Q	A	A	T	K	Y	L	V	G	H	S	D	A	M	I	G	T	A	V	C	N	A	R	C	W	E	Q	L	R	E	N	A	Y	L	M	G	Q	M	V	D	A	D	T	A	Y	I	T
Query Conservation															.	.	.	.
Alig confidence		.	.												.	.	.	.																									.	.
Template Conservation		.	.																																								.	.
Template Sequence		.	.	Q	A	L	L	V	F	D	E	V	Q	C	G	M	G	R	T	G	D	L	F	A	Y	M	H	Y	G	V	T	P	D	I	L	T	S	A	K	A	L	G	.	.	G	G	F	P	V	S	A	M	L	T	T	Q	E	I	A	S	A	F	S	T	Y	G	G	N	P	L	A	C	A	V	A	G	A	A	F	D	I
Template Known Secondary structure		.	.	T								T	T	T	T	T	T	T	T	S	S	S	S						T				S						G	G	G	T	.	.	T	T	S													T	T
Template Predicted Secondary structure		.	.																																								.	.
Template SS confidence
				220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.			.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	R	G	L	R	T	L	G	V	R	L	R	Q	H	H	E	S	S	L	K	V	A	E	W	L	A	E	H	P	Q	V	A	R	V	N	H	P	A	L	P	G	S	K	G	H	E	F	W	K	R	D	F	T	G	S	S	G	L	F	S	F	V	L	K	K	K	L	N	N	E	E	L	A	N	Y	L	D	N	F	S
Query Conservation
Alig confidence																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Template Conservation																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Template Sequence		I	N	T	P	E	V	L	Q	G	I	H	T	K	R	Q	Q	F	V	Q	H	L	Q	A	I	D	E	Q	F	D	I	F	S	D	I	R	G	M	G	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	I	G	A	E	L	K	P	K	.	Y	K	G	R	A	R	D	F	L	Y	A	G	A
Template Known Secondary structure			S	S																																			T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								G	G	.	G	T	T
Template Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Template SS confidence
		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340																			.	.	.	.	.	.	.	.	.		350	.	.	.	.	.	.	.	.	.	360	.	.
		333	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	F	S	M	A	Y	S	W	G	G	Y	E	S	L	I	L	A	N	Q	P	E	H	I	A	A	I	R	P	Q	G	E	I	D	F	S	G	T	L	I	R	L	H	I	G	L	E	D	V	D	D	L	I	A	D	L	D	A	G	F	A	R	I	V
Query Conservation
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	A	G	V	M	V	L	N	A	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	D	V	M	R	F	A	P	S	L	V	V	E	E	A	D	I	H	E	G	M	Q	R	F	A	Q	A	V
Template Known Secondary structure			T	T						S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T								T	T
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		363	.	.	.	.	.	.	370	.	.																										.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions