Job Description P06721 Confidence 99.96% Date Wed Jan 25 15:20:11 GMT 2012 Rank 81 Aligned Residues 324 % Identity 16% Template c2huuA_ PDB info PDB header:transferase Chain: A: PDB Molecule:alanine glyoxylate aminotransferase; PDBTitle: crystal structure of aedes aegypti alanine glyoxylate2 aminotransferase in complex with alanine Resolution 2.10 Å

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		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.				.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
Predicted Secondary structure																																								.	.	.
Query SS confidence																																								.	.	.
Query Sequence		E	A	K	K	H	A	T	R	N	R	A	N	G	E	L	F	Y	G	R	R	G	T	L	T	H	F	S	L	Q	Q	A	M	C	E	L	E	G	G	.	.	.	A	G	C	V	L	F	P	C	G	A	A	A	V	A	N	S	I	L	A	F	I	E	Q	G	D	H	V	L	M	T	N	T	A	Y	E	P	S	Q	D
Query Conservation																																								.	.	.
Alig confidence																	.	.																						.	.	.																																							.
Template Conservation																	.	.																																																															.
Template Sequence		Q	R	V	L	D	A	M	S	R	P	I	L	G	H	L	.	.	H	P	E	T	L	K	I	M	D	D	I	K	E	G	V	R	Y	L	F	Q	T	N	N	I	A	T	F	C	L	S	A	S	G	H	G	G	M	E	A	T	L	C	N	L	L	E	D	G	D	V	I	L	I	G	H	T	G	H	W	G	D	R	.
Template Known Secondary structure								T	T	S					T	T	.	.	S																			T				S						S	S																T	T								S	S						.
Template Predicted Secondary structure																	.	.																																																															.
Template SS confidence
		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.			.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.						.	.	.	.	140	.	.	.	.	.	.	.		.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure																					.	.	.	.	.													.
Query SS confidence																					.	.	.	.	.													.
Query Sequence		F	C	S	K	I	L	S	K	L	G	V	T	T	S	W	F	D	P	L	.	.	.	.	.	I	G	A	D	I	V	K	H	L	Q	P	N	.	T	K	I	V	F	L	E	S	P	G	S	I	T	M	E	V	H	D	V	P	A	I	V	A	A	V	R	S	V	V	P	D	A	I	I	M	I	D	N	T	W	A	A
Query Conservation																					.	.	.	.	.													.
Alig confidence		.																			.	.	.	.	.													.																														.	.
Template Conservation		.																																																																		.	.
Template Sequence		.	S	A	D	M	A	T	R	Y	G	A	D	V	R	V	V	K	S	K	V	G	Q	S	L	S	L	D	E	I	R	D	A	L	L	I	H	K	P	S	V	L	F	L	T	Q	G	D	S	S	T	G	V	L	Q	G	L	E	G	V	G	A	L	C	H	Q	H	.	.	N	C	L	L	I	V	D	T	V	A	S	L
Template Known Secondary structure		.								T	T										T	T																		S						S			T	T	T	T						T	T								T	.	.	T								T	T	T	B
Template Predicted Secondary structure		.																																																																		.	.
Template SS confidence
			109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.			.	.	.	.	.	.	180	.	.	.	.	.
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	V	L	F	K	A	L	D	F	G	I	D	V	S	I	Q	A	A	T	K	Y	L	V	G	H	S	D	A	M	I	G	T	A	V	C	N	A	R	C	W	E	Q	L	R	E	N	A	Y	L	M	G	Q	M	V	D	A	D	T	A	Y	I	T	S	R	G	L	R	T	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																													.	.																																								.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																													.	.
Template Sequence		G	G	A	P	M	F	M	D	R	W	E	I	D	A	M	Y	T	G	S	Q	V	L	G	A	P	P	G	.	.	I	T	P	V	S	F	S	H	R	A	V	E	R	Y	K	R	R	N	T	K	V	K	V	Y	Y	W	D	M	S	L	V	G	D	Y	W	G	C	F	G	R	P	R	I	Y	H	H	T	I	S	S	T
Template Known Secondary structure		T	T	B				T	T	T	T	T		S													S	S	.	.																T		S	S			S		G	G	G									T	T		S	S	S					S
Template Predicted Secondary structure																													.	.
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.			.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
				259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	L	G	V	R	L	R	Q	H	H	E	S	S	L	K	V	A	E	W	L	A	E	H	P	Q	V	A	R	V	N	H	P	A	L	P	G	S	K	G	H	E	F	W	K	R	D	F	T	G	S	S	G	L	F	S	F	V	L	K	K	K	L	N	N	E	E	L	A	N	Y	L	D	N	F	S	L	F	S	M
Query Conservation		.	.
Alig confidence		.	.																																					.
Template Conservation																																								.
Template Sequence		L	L	Y	G	L	R	E	A	I	A	M	A	C	E	E	G	L	P	A	L	I	A	R	H	E	D	C	A	K	R	L	Y	R	G	L	Q	D	A	.	G	F	E	L	Y	A	D	P	K	D	R	L	S	T	V	T	T	I	K	V	P	Q	G	V	D	W	L	K	A	A	Q	Y	A	M	K	T	Y	L	V	E	I
Template Known Secondary structure																																							T	.	T			B	S	S		G	G	G	B		T	T								T	T
Template Predicted Secondary structure																																								.
Template SS confidence
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.		.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
		337	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.		.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.
Predicted Secondary structure																																								.
Query SS confidence																																								.
Query Sequence		A	Y	S	W	G	G	Y	E	S	L	I	L	A	N	Q	P	E	H	I	A	A	I	R	P	Q	G	E	I	D	F	S	G	T	L	I	R	L	H	.	I	G	L	E	D	V	D	D	L	I	A	D	L	D	A	G	F	A	R	I	V
Query Conservation																																								.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Template Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	G	G	L	G	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	A	G	Q	V	F	R	I	G	L	M	G	Q	N	A	T	T	E	R	V	D	R	V	L	Q	V	F	Q	E	A	V
Template Known Secondary structure		B				G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	T	T	T								G	G	G		S
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		344	.	.	.	.	.																								350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions