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Job DescriptionP06721
Confidence100.00%DateWed Jan 25 15:20:11 GMT 2012
Rank1Aligned Residues392
% Identity100%Templatec2gqnB_
PDB info PDB header:lyaseChain: B: PDB Molecule:cystathionine beta-lyase; PDBTitle: cystathionine beta-lyase (cbl) from escherichia coli in complex with2 n-hydrazinocarbonylmethyl-2-nitro-benzamide
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.........50.........60.........70.........80...
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Query Sequence  KKLDTQLVNAGRSKKYTLGAVNSVIQRASSLVFDSVEAKKHATRNRANGELFYGRRGTLTHFSLQQAMCELEGGAGCVLF
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Template Conservation      
  
  
            
   
 
                      
 
   
    

  

 
 
 
  
  
Template Sequence  KKLDTQLVNAGRSKKYTLGAVNSVIQRASSLVFDSVEAKKHATRNRANGELFYGRRGTLTHFSLQQAMCELEGGAGCVLF
Template Known Secondary structure 

TT

TTSSS





SB


SSTTTTTS

BGGG

T
S
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   4.....10.........20.........30.........40.........50.........60.........70.........80...
 
   84.....90.........100.........110.........120.........130.........140.........150.........160...
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Query Sequence  PCGAAAVANSILAFIEQGDHVLMTNTAYEPSQDFCSKILSKLGVTTSWFDPLIGADIVKHLQPNTKIVFLESPGSITMEV
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Template Conservation   

  
   

  
   

 

                    

     
  
   
       
  
      
 

  
Template Sequence  PCGAAAVANSILAFIEQGDHVLMTNTAYEPSQDFCSKILSKLGVTTSWFDPLIGADIVKHLQPNTKIVFLESPGSITMEV
Template Known Secondary structure  SS

TT
TTS
TGGGGT

TT
GGGGGGG

TTSS
TTT


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   84.....90.........100.........110.........120.........130.........140.........150.........160...
 
   164.....170.........180.........190.........200.........210.........220.........230.........240...
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Query Sequence  HDVPAIVAAVRSVVPDAIIMIDNTWAAGVLFKALDFGIDVSIQAATKYLVGHSDAMIGTAVCNARCWEQLRENAYLMGQM
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Template Conservation   

  
  

     
  



 
   
        
 
    
  
   
  
   
 
         
       
  
Template Sequence  HDVPAIVAAVRSVVPDAIIMIDNTWAAGVLFKALDFGIDVSIQAATKYLVGHSDAMIGTAVCNARCWEQLRENAYLMGQM
Template Known Secondary structure 


TT

TTTTTTSS
GGGGT
STTTTTT
SSS



TT

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   164.....170.........180.........190.........200.........210.........220.........230.........240...
 
   244.....250.........260.........270.........280.........290.........300.........310.........320...
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Query Sequence  VDADTAYITSRGLRTLGVRLRQHHESSLKVAEWLAEHPQVARVNHPALPGSKGHEFWKRDFTGSSGLFSFVLKKKLNNEE
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Template Conservation       
      
     
       
  

  
             
       
               
        
Template Sequence  VDADTAYITSRGLRTLGVRLRQHHESSLKVAEWLAEHPQVARVNHPALPGSKGHEFWKRDFTGSSGLFSFVLKKKLNNEE
Template Known Secondary structure 

TT
TT
TTSTTSTT
S


SSS


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   244.....250.........260.........270.........280.........290.........300.........310.........320...
 
   324.....330.........340.........350.........360.........370.........380.........390.....
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Query Sequence  LANYLDNFSLFSMAYSWGGYESLILANQPEHIAAIRPQGEIDFSGTLIRLHIGLEDVDDLIADLDAGFARIV
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Template Conservation         
    
  
 
   

                  
     



 


  



 

  

  
 
Template Sequence  LANYLDNFSLFSMAYSWGGYESLILANQPEHIAAIRPQGEIDFSGTLIRLHIGLEDVDDLIADLDAGFARIV
Template Known Secondary structure  TT
SS

S


SSS

TT
TTS




S


SS
T
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   324.....330.........340.........350.........360.........370.........380.........390.....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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